locus tag:
FAM19471-i1-1.1_001147
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
transposase |
|
|
|
Ortholog
|
N0.HOG0006286 |
transposase, partial |
|
|
Eggnog Protein
|
EP:tnpA1 |
|
|
|
Eggnog Ortholog
|
EO:COG3464 |
|
|
|
Eggnog Description
|
ED:PFAM transposase |
|
|
Sequences
Nucleotide sequence (GC-content: 42.4 %):
ATGACTGATTATATTAAAAATATCCTTCAAATTAAAGACCCTAATCTTCATTTCACAGACGTTGTCTTTGAAAATAATGACGGACGGGAGACGCAGGTCTTCATTGGGACGGTCTCGCTTAAATTGGATCGGTGCCCACATTGCGGCTTTGCGGATACCTTCATTAAGAATGGCCATTCTTACCAAACCATTAAGTACCTCTCAATTAACGAAAGTTGTCCCACTATGTTGCGGATCGGTAAGCAACGCCTGAGATGTAAGAATTGCCAAGATTCGTTCATGGCAAAGACCAACGTCGTTGATAAATACTGTTCCATTGCCAAAGCAGTTAAACACAAGGCACTTACGATGCTTGAAAGTAATGTCTCTCAAAAGGACGTGTCTAAGTTTACCGGTGTGTCACCTAGTACCATTGGCCGACTCCTAGACAGTGATCAAGCGCTCCTTCGCTTTAATAGTCGCACTTTACCCACTAATATTGCCATTGATGAGTTCCGTGGTCCGCAGGGGAAGTATTGCTTCATTATCGTTGATAATGATACCTCACAAATCTACCAAATTCTC
Protein sequence:
MTDYIKNILQIKDPNLHFTDVVFENNDGRETQVFIGTVSLKLDRCPHCGFADTFIKNGHSYQTIKYLSINESCPTMLRIGKQRLRCKNCQDSFMAKTNVVDKYCSIAKAVKHKALTMLESNVSQKDVSKFTGVSPSTIGRLLDSDQALLRFNSRTLPTNIAIDEFRGPQGKYCFIIVDNDTSQIYQIL
GenBank Info
locus_tag - FAM19471-i1-1.1_001147
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639477.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - transposase
protein_id - extdb:FAM19471-i1-1.1_001147
Gene Locus
Located on scaffold FAM19471-i1-1_scf20
FAM19471-i1-1.1_001146
