update range to 10000 bp
locus tag: FAM19471-i1-1.1_001170 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R02718 D-Alanine:poly(ribitol phosphate) ligase (AMP-forming); ATP + D-Alanine + Poly(ribitol phosphate) <=> AMP + Diphosphate + O-D-Alanyl-poly(ribitol phosphate) kornec00473kornec01100
Ortholog
 N0.HOG0001119 D-alanine--poly(phosphoribitol) ligase subunit DltA
KEGG gene
 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13] kornec00473kornec01100kornec01503kornec02020kornec05150
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901265 nucleoside phosphate binding
Gene Ontology
 GO:1901137 carbohydrate derivative biosynthetic process
Gene Ontology
 GO:1901135 carbohydrate derivative metabolic process
Gene Ontology
 GO:0097367 carbohydrate derivative binding
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0071840 cellular component organization or biogenesis
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071554 cell wall organization or biogenesis
Gene Ontology
 GO:0070589 cellular component macromolecule biosynthetic process
Gene Ontology
 GO:0055085 transmembrane transport
Gene Ontology
 GO:0051234 establishment of localization
Gene Ontology
 GO:0051179 localization
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0044085 cellular component biogenesis
Gene Ontology
 GO:0044038 cell wall macromolecule biosynthetic process
Gene Ontology
 GO:0044036 cell wall macromolecule metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043169 cation binding
Gene Ontology
 GO:0043168 anion binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0042546 cell wall biogenesis
Gene Ontology
 GO:0036094 small molecule binding
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0032559 adenyl ribonucleotide binding
Gene Ontology
 GO:0032555 purine ribonucleotide binding
Gene Ontology
 GO:0032553 ribonucleotide binding
Gene Ontology
 GO:0030554 adenyl nucleotide binding
Gene Ontology
 GO:0030203 glycosaminoglycan metabolic process
Gene Ontology
 GO:0022857 transmembrane transporter activity
Gene Ontology
 GO:0017076 purine nucleotide binding
Gene Ontology
 GO:0016881 acid-amino acid ligase activity
Gene Ontology
 GO:0016879 ligase activity, forming carbon-nitrogen bonds
Gene Ontology
 GO:0016874 ligase activity
Gene Ontology
 GO:0016208 AMP binding
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009273 peptidoglycan-based cell wall biogenesis
Gene Ontology
 GO:0009252 peptidoglycan biosynthetic process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008144 obsolete drug binding
Gene Ontology
 GO:0006810 transport
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006024 glycosaminoglycan biosynthetic process
Gene Ontology
 GO:0006023 aminoglycan biosynthetic process
Gene Ontology
 GO:0006022 aminoglycan metabolic process
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0005215 transporter activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000270 peptidoglycan metabolic process
Gene Ontology
 GO:0000166 nucleotide binding
Eggnog Protein
 EP:dltA
Eggnog Ortholog
 EO:COG1020
Eggnog Description
 ED:Catalyzes the first step in the D-alanylation of lipoteichoic acid (LTA)
EC Number
 EC:6.1.1.13 D-alanine---poly(phosphoribitol) ligase; D-alanyl-poly(phosphoribitol) synthetase; D-alanine: membrane acceptor ligase; D-alanine-D-alanyl carrier protein ligase; D-alanine-membrane acceptor ligase; D-alanine-activating enzyme kornec00473kornec01100
Gene Code
 dltA
Gene Product
 D-alanine--poly(phosphoribitol) ligase subunit DltA

Occurs in the following pathway maps:

Pathway Description
kornec00473 D-Alanine metabolism
kornec01100 Metabolic pathways
kornec01503 Cationic antimicrobial peptide (CAMP) resistance
kornec02020 Two-component system
kornec05150 Staphylococcus aureus infection

Sequences

Nucleotide sequence (GC-content: 54.8 %):

TTGGTACAAAACATTATTCAAGAAATTGACCGGATCGCCCAAGCGCAACCGGACTTCCCCGCCTTCGATGAGCTGGGGACTATCCACTCCTACGGCGATCTTTACCACTACTCTAATGCGCTAGCGGCGTGGTTAGACCAACAAAACTTACCCGCTAACAGCCCAATTTTGATTTACGGTGACCACCAGTTTGAAATGATGGCTTCCTTCATCGGTTGCTTAAAGGCCGGTCACGCCTACATCCCGGTGGAAACCGATTCGGCCCTGCCGCGGGTCAAGTCCATCTTAACGACCGCCGCACCGCAAATGGTGCTGGCCGTCGATGACTTCCCGGCTGACGAACTTGACTTTGCTGGCACCGTGGTCAACCACGACCAGTTAGTCGACCTGCTCCACCAAGAAGTCGACTACCAACTGGATCACTTCGTTGACGGCGACGACCTGTTTTACATCCTCTTCACATCCGGGACGACCGGGTCACCCAAGGGGGTTGAAATCACCCACACCAACATCTGCTCCTTTGCCAGTTGGATGGTGTCTGACGCCTTCAACCTCCCCCACAACCAAACCTTCCTCGGCCAACCGCCGTTTTCCTTTGACCTATCGAACATGTACTGGCTACCAGCGCTGTTGACCGGGTCAACGATCAAGGCCCTGCCACGGACAGTGGTCCAAAACTTTGGCCAACTCTTTACGGTCGTGCCAAAGTTAGGCGTTTCGGTTTACGTTTCGACCCCGTCCTTTGTCGACATGCTCTTGTTGTCCCCGGACTTCAACCAAGAGAAGATGCCGGAACTCAAGTACTTCCTCTTCTGCGGGGAAGAACTGACCGTTTCGACGGCCAAGCGCTTGTTTACAAACTTCCCGGACGCCCATATCTTTAACACTTACGGGCCAACCGAAGCGGCCGTCGCCATTACCAGCGTGGAAATCACCAAGGAAATGGTTGCTACGGCCAAGCGCCTGCCGATCGGCTACGACAAGCCCAACGTCACCACTTCCATCTGGGACGATGGCAAGGAAGTGACCGAGCCAAACGTTCACGGTGAAATCATCATCGCCGGCGAGTCGGTAGCCCCCGGCTACATGAACAACCCGGAAAAAACAGCGGCTAACTTCTTCAAGCTCAACGGGGTCCAAGCTTACCGGACTGGGGACGCCGGCTACATCGATGAAGACGGGATGCGCCACATCATCGGGCGGATGGACTTCCAAATCAAGCTCCACGGTTTCCGGATCGAACTAGACGAGGTTCGCTCCAGCCTTGAGCTTAGCCAGTACGTTAAGCAAGCCGTCGCCGTACCAAAGTACGCTAAGGACGGCAAGGTTTCCCACCTGATCGCCTACATCATCGCCAAGGATAACGACTTTGCAGACGACAAGGCGCTGACCAAGGCGATCCGGGCCGACTTAAAGGATCAGATTATGGACTACATGATGCCGACCCAGTTCGTCTACGTGGATTCCTTCCCGACCTCGGCCAACGGTAAGATTGCGGTTAAGCAAATGATCGCGGAGGCTAACGAGTAA

Protein sequence:

MVQNIIQEIDRIAQAQPDFPAFDELGTIHSYGDLYHYSNALAAWLDQQNLPANSPILIYGDHQFEMMASFIGCLKAGHAYIPVETDSALPRVKSILTTAAPQMVLAVDDFPADELDFAGTVVNHDQLVDLLHQEVDYQLDHFVDGDDLFYILFTSGTTGSPKGVEITHTNICSFASWMVSDAFNLPHNQTFLGQPPFSFDLSNMYWLPALLTGSTIKALPRTVVQNFGQLFTVVPKLGVSVYVSTPSFVDMLLLSPDFNQEKMPELKYFLFCGEELTVSTAKRLFTNFPDAHIFNTYGPTEAAVAITSVEITKEMVATAKRLPIGYDKPNVTTSIWDDGKEVTEPNVHGEIIIAGESVAPGYMNNPEKTAANFFKLNGVQAYRTGDAGYIDEDGMRHIIGRMDFQIKLHGFRIELDEVRSSLELSQYVKQAVAVPKYAKDGKVSHLIAYIIAKDNDFADDKALTKAIRADLKDQIMDYMMPTQFVYVDSFPTSANGKIAVKQMIAEANE

GenBank Info

gene - dltA
locus_tag - FAM19471-i1-1.1_001170
EC_number - 6.1.1.13
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638445.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - D-alanine--poly(phosphoribitol) ligase subunit DltA
protein_id - extdb:FAM19471-i1-1.1_001170

Gene Locus

Located on scaffold FAM19471-i1-1_scf21

FAM19471-i1-1.1_001169
FAM19471-i1-1.1_001171