update range to 10000 bp
locus tag: FAM19471-i1-1.1_001184 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 pepF
Gene Product
 oligoendopeptidase F
Ortholog
 N0.HOG0003381 oligoendopeptidase F
KEGG gene
 K08602 pepF, pepB; oligoendopeptidase F [EC:3.4.24.-]
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:0140096 catalytic activity, acting on a protein
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0070011 -
Gene Ontology
 GO:0051604 protein maturation
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044267 -
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043603 cellular amide metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016485 protein processing
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008237 metallopeptidase activity
Gene Ontology
 GO:0008233 peptidase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006518 peptide metabolic process
Gene Ontology
 GO:0006508 proteolysis
Gene Ontology
 GO:0006465 signal peptide processing
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004222 metalloendopeptidase activity
Gene Ontology
 GO:0004175 endopeptidase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:pepF
Eggnog Ortholog
 EO:COG1164
Eggnog Description
 ED:oligoendopeptidase F

Sequences

Nucleotide sequence (GC-content: 56.6 %):

ATGACCAACACCCGTTTACTGGCGCGCGATGAGGTTCCCACCGAATTAACCTGGGACTTGACGCTTTTGTACCCATCCGATGACGCCATGCGGGCGGACCTTGATGACACCTTACTGCTGGCCGACAAGCTCTCCGGGTTTGCCGGCCATCTTAATGGGGCCAAGGAGCTGCTCGCTGCATTAAACACTCACAAGCAAATCGAAACCGACCTGGAAAAAGAATACGTCTACGCCTTCTTACGCCGGGACAGTGACACCACCGATGCAACCGCCAACGCCCTGTTTGGGACGGCAGCCAAGGCGGCCACGACGATCGCCACCAAGGAATCCTTTTTGGAACCGGAAATTTTAGCGATTGACGAAGGGGCGCTGGACGGTTATTTCAAGCAGGAACCAGGACTCGAAGAATTCCGCTACGAGTTAGAACAGATCCGCCTGCAAAGGGGCCACGTACTGACGACGAGCGAAGAGAAGCTTTTGTCGCGGCTCAACCGGTCGTTGGATAGTGCCGATGAAATCTACAACACCTTAAACGACGCCGACCTCAACTTCGGCCAGGTTCACGACGATGAGGGTAACCTGGTCCAACTGACCCACGGTAACCGTAGCCAGTTCACCGAGTCCTTGAAACGGCCGGTCAGAAAAGAGGCCACCTTGGCCTACGCCAAGCCTTACCACGACCTACGCAACACCTTTGCCCAGACCCTCAACTCCTTTGTCGGGGCCCAAAATGCGGTCGCCGAACTGCGCTACTATCAATCGGGGCGCCAGGCCGCCTTGGCCCCGCACCAGATTGACGAGCAAGTGTACGACACCCTGGTAAAAACGGTCAATGACCACCTGGATTTGGCCCACCGCTGGTACCGGATTAAAAAGGATTATCTGGGGTTGGCCGACTTTAACCAGGCCGATATCAACACCCCGCTGGCCGGCGATGACGTGTTGAAGACGACCTTTGCGGAGGGCAAGCAGCTGACCTTAGATGCCCTGAGCGTGCTGGGTGGTGAGTACACGGCCGGGCTGAAAGAGGAGTTTGACCACCGCTGGATTGACGCCGCCGAAAACGCCGGTAAGCGCTCAGGGGGTTACCAAATCAGCGTTTACAAGGCCAACCCTTTCATCTTGCTAAACTGGACCGATAAGCTGTATTCGACCTACGTCTTGGCTCACGAGTCCGGCCACGCCATGCACTCCTGGTTTAGCCAGCACCACCAGCCGGCCCAGTACGCCGACGCCCCGATCTTCTTAGCCGAGGTGGCTTCGACCTTTAACGAGCAGATCCTGACCAGCTACCTGCTGGAAAAGTACCAAGCTGATAAAAAGGTGCAACTTTACGTCTTAGAACAAGCGATCGATGGCTTTATTGGCACGATCTATCGGCAGACCCAGTTTGCCGAGTTTGAGCACACCGCCTACCAAACCGAACAGGCGGGGCAGGCGTTAACGGCCGACTTTTTGGACCAAACCAGCAGCGCCCTGCTGAAGAAGTATTACGGGCCGGACGTGGCCCTGTTAGACGGCACGGCGACCCAGTCTTGGGCCTACGTCCCGCACTTTTACATGAATTACTACGTCTACCAGTACGCCACCTCCTGGGCGGCCTCGACCAGCTTAGCTAGCGCCGTTTGGCAACACAAGCCGGGGGCCAAGGAAGCCTACCTGAGCTTCCTTTCTGCTGGGGGCTCGGCGGCACCGCTCGAAATCCTCAAGCGAGCCGGTGTGGACGCCACCACCAGCCAATACCTAGAGGAAGCCTTGGCGGTCTTTGAACGGTACCTAGACAGAATTGAAGTGCTACTTAAGAACTAA

Protein sequence:

MTNTRLLARDEVPTELTWDLTLLYPSDDAMRADLDDTLLLADKLSGFAGHLNGAKELLAALNTHKQIETDLEKEYVYAFLRRDSDTTDATANALFGTAAKAATTIATKESFLEPEILAIDEGALDGYFKQEPGLEEFRYELEQIRLQRGHVLTTSEEKLLSRLNRSLDSADEIYNTLNDADLNFGQVHDDEGNLVQLTHGNRSQFTESLKRPVRKEATLAYAKPYHDLRNTFAQTLNSFVGAQNAVAELRYYQSGRQAALAPHQIDEQVYDTLVKTVNDHLDLAHRWYRIKKDYLGLADFNQADINTPLAGDDVLKTTFAEGKQLTLDALSVLGGEYTAGLKEEFDHRWIDAAENAGKRSGGYQISVYKANPFILLNWTDKLYSTYVLAHESGHAMHSWFSQHHQPAQYADAPIFLAEVASTFNEQILTSYLLEKYQADKKVQLYVLEQAIDGFIGTIYRQTQFAEFEHTAYQTEQAGQALTADFLDQTSSALLKKYYGPDVALLDGTATQSWAYVPHFYMNYYVYQYATSWAASTSLASAVWQHKPGAKEAYLSFLSAGGSAAPLEILKRAGVDATTSQYLEEALAVFERYLDRIEVLLKN

GenBank Info

gene - pepF
locus_tag - FAM19471-i1-1.1_001184
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014562720.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - oligoendopeptidase F
protein_id - extdb:FAM19471-i1-1.1_001184

Gene Locus

Located on scaffold FAM19471-i1-1_scf22

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_001183
FAM19471-i1-1.1_001185