update range to 10000 bp
locus tag: FAM19471-i1-1.1_001186 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R01542 2-Dehydro-3-deoxy-D-gluconate:NAD+ 5-oxidoreductase; 2-Dehydro-3-deoxy-D-gluconate + NAD+ <=> (4S)-4,6-Dihydroxy-2,5-dioxohexanoate + NADH + H+ kornec00040kornec01100
Ortholog
 N0.HOG0000778 SDR family oxidoreductase
KEGG gene
 K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] kornec00040kornec01100
Gene Product
 glucose 1-dehydrogenase
Eggnog Protein
 EP:kduD
Eggnog Ortholog
 EO:COG1028
Eggnog Description
 ED:Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
EC Number
 EC:1.1.1.47 glucose 1-dehydrogenase [NAD(P)+]; D-glucose dehydrogenase (NAD(P)+); hexose phosphate dehydrogenase; beta-D-glucose:NAD(P)+ 1-oxidoreductase; glucose 1-dehydrogenase kornec00030kornec01100kornec01120
EC Number
 EC:1.1.1.127 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase; 2-keto-3-deoxygluconate 5-dehydrogenase; 2-keto-3-deoxy-D-gluconate dehydrogenase (ambiguous); 2-keto-3-deoxygluconate (nicotinamide adenine dinucleotide (phosphate)) dehydrogenase; 2-keto-3-deoxy-D-gluconate (3-deoxy-D-glycero-2,5-hexodiulosonic acid) dehydrogenase (ambiguous) kornec00040kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00030 Pentose phosphate pathway
kornec00040 Pentose and glucuronate interconversions
kornec01100 Metabolic pathways
kornec01120 Microbial metabolism in diverse environments

Sequences

Nucleotide sequence (GC-content: 56.0 %):

ATGTTCAACATCAACAGCTTCAAGTTAACTGACAAGGTCGCCATCATCACCGGCGGGGTCTCGGGGCTAGGTGAATACTACACCCGGGCCATGCTGACGGTCGGCGCTAAGGTGATGGTGGTTAGCCACTCCGAGCGGGACTGGGACAAGATTAAGGCCGTCGCCGCAGAGCTTGGTGGCCAGGTCGCCTTCTTCGCCCAAAACGTCACCGCAGAAGACGCCCCGCAAAAGATTGTTAACGCCACCTTGGACCAATACGGCCGCATCGACATCTTAGTCAACAACGCCGGCCGCCAAATTTGCCACCCCTGGGATGAATTCCCCAAGGAAGACTGGCAAAAGGTGCTCGATTTAAACCTCAATTCGGTTTACTACCTTTCCCAAGAAGTGGCCAAGGTAATGAAACGACAGGGCGGCGGTAAGATCATCAACATTGGTTCGATGCAATCCTACCGGGCCGGCAAGTTCATCTTCCCTTACACCGCTAGCAAGCACGGCGTTGTCGGTTTAACCAAGGCTTACGCCGACGCATTGGCCGCTGACAACATCCAGGTCAACGCCCTGGCGCCGGGTTACATCAACACCCCGATGACCAAAGCGCTACAAGAAGACCCGGTTAGAAGCAAGGAAATCTTGGAACACATCCCGGCCGGACACTGGGCCGAACCGGCTGAACTAATGGGCACCGTTGTCTTCTTGGCCAGCGCAGCTTCTAACTACGTCACCGGGGTGACGATCCCGGTTGACGGTGGCTACCTACTGCGTTAG

Protein sequence:

MFNINSFKLTDKVAIITGGVSGLGEYYTRAMLTVGAKVMVVSHSERDWDKIKAVAAELGGQVAFFAQNVTAEDAPQKIVNATLDQYGRIDILVNNAGRQICHPWDEFPKEDWQKVLDLNLNSVYYLSQEVAKVMKRQGGGKIINIGSMQSYRAGKFIFPYTASKHGVVGLTKAYADALAADNIQVNALAPGYINTPMTKALQEDPVRSKEILEHIPAGHWAEPAELMGTVVFLASAASNYVTGVTIPVDGGYLLR

GenBank Info

locus_tag - FAM19471-i1-1.1_001186
EC_number - 1.1.1.47
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639583.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - glucose 1-dehydrogenase
protein_id - extdb:FAM19471-i1-1.1_001186

Gene Locus

Located on scaffold FAM19471-i1-1_scf22

FAM19471-i1-1.1_001185
FAM19471-i1-1.1_001187