update range to 10000 bp
locus tag: FAM19471-i1-1.1_001235 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0000123 IS3 family transposase
KEGG gene
 K07497 K07497; putative transposase
Eggnog Ortholog
 EO:COG2801
Eggnog Description
 ED:Integrase core domain
Gene Product
 DDE-type integrase/transposase/recombinase

Sequences

Nucleotide sequence (GC-content: 38.1 %):

TTATATTCCAGTTCATGACGGATTCGTTTATTTAACCAGTATTATGGACTTGTACTCCCGACGGATCATTGGTTGGGACTTATCTGAAACCTTGGAGGTATCGAATGTCATCCCACTTATTGAAAAGGCTAAGCACAGTCGCCATATTAGCAAGCCATTAATCATGCACAGTGATCGTGGTAGTCAGTTTACGTCTGAAGCTTACAATCAAGTTACAGCTAACATGACATTAAGCTATTCAAAGAAAGCTTATCCTTGGGATAATGCCTGCATTGAGTCGTTTCATGCCTTGATTAAGCGTGAATGGATAAATCGGTTTAAAATCCATTCATACTCCGAAGCTAAACGACTAGTTTTTCAGTACATTGAAACGTTTTACAACACAGTTAGAATTCACAGTCACTGTGGATTCAAATCACCAAAGCAACTTGAAGATGAGTATCAAACTCAAATTCAAAATTTAGTCGTGGCATAG

Protein sequence:

YIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKAKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA

GenBank Info

locus_tag - FAM19471-i1-1.1_001235
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003680947.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 2
transl_table - 11
product - DDE-type integrase/transposase/recombinase
protein_id - extdb:FAM19471-i1-1.1_001235

Gene Locus

Located on scaffold FAM19471-i1-1_scf24

FAM19471-i1-1.1_001234
FAM19471-i1-1.1_001236