update range to 10000 bp
locus tag: FAM19471-i1-1.1_001254 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001591 ATP-dependent DNA helicase
KEGG gene
 K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Gene Ontology
 GO:1990234 transferase complex
Gene Ontology
 GO:1902494 catalytic complex
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0090305 nucleic acid phosphodiester bond hydrolysis
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0061695 transferase complex, transferring phosphorus-containing groups
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0045005 DNA-templated DNA replication maintenance of fidelity
Gene Ontology
 GO:0045004 DNA replication proofreading
Gene Ontology
 GO:0044776 DNA polymerase III, core complex
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042575 DNA polymerase complex
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0032991 protein-containing complex
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009360 DNA polymerase III complex
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008408 3'-5' exonuclease activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006281 DNA repair
Gene Ontology
 GO:0006261 DNA-templated DNA replication
Gene Ontology
 GO:0006260 DNA replication
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004527 exonuclease activity
Gene Ontology
 GO:0004518 nuclease activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:dinG
Eggnog Ortholog
 EO:COG0847
Eggnog Description
 ED:helicase involved in DNA repair and perhaps also replication
EC Number
 EC:3.6.4.12 Transferred to 5.6.2.3 and 5.6.2.4
Gene Product
 ATP-dependent DNA helicase

Sequences

Nucleotide sequence (GC-content: 58.2 %):

ATGGTTAGTTTGGCAAAGAAAAAACGACGGGGACCAGTGTACGCGGTGGTCGACTTAGAAACGACCGGCACCAGCGTTAAGACCGGTTCACGGATCATCCAGATTGGTTGCGTCCTGGTCCAAGACGGCCAGGTCATCAACGAATTTGAAACCAAGATCAATCCCCGTACGGTGGTTCCCTTAACCATTGAACAACTGACCGGAATTAAAAATAACGACGTCAAGGACGCCCCCCTGTTTGAAGACGTGGCGCCGACCTTAAAGAGCCTCTTAGATGACACTATTTTCGTCGCCCACAACGTCAACTTCGACTTTCCCTTTTTAAACGCCGAATTTGAACGGGCGGGGGAAGCGCCATTGACGATCCCGGCGATCGATACGGTTACCTTGAGTCAGATTTTAATGCCCACGGCGCCCAGCTTCCGGCTCCGGGATCTGACCAGTTACCTGGCGATTGACCACGATCAACCGCACAGCGCCGTTTCCGACGCAGTCGCGACCGCCCACCTCCTAATTGAGCTCTTAAAGCGGCTGGCTGACCTGCCGACCATCACCCTGCAAAGCATCGTTGACTTGCAGTTGACCCTGCCGCAGAAGACGGCCTGGCTCTTTGAACGGGAACTGGCCAAGCGGGCGGTGGAACCCCAGCCGCTCAAAGAGGAGCTGTACGTTTCAAACGGCCTGGTCCTCCACAAGGTCCGCCCGGTTAGCGTGCCGACCGCCCAGGTGGCGGGGAAGTACCCGGCCACCAAGCGCCAAAAGAAGTATTTGTTTGGTGATGACCTCGCCTACCGCCCGCTCCAGTCCAAAATGATGAACGCCATCTATAACCAGTTCTCCCAGGACGAGCCGGTCCGCCAGTTGGTCTTAGAGGCCGGCACCGGGACGGGGAAGACGCTGGGGTACTTGTTGCCGCTGGCCTATTTGACCTACCCGGACCACCGGATCGTGGTTTCAACGGCCACCAACCTCTTGCAACAGCAGGTGGCTAAGCAAACGGTTGCCATCTTAAACGACCACCTGCCCTTCCAGTTGACGGCGGTGGTGGTGAAGGGTAACGATCACTACTTAAGTATTGACCGCTTCGCCCACTCGCTGGCCGTGCACGAGGATTCCCAGCTGGCCCAGGCGCTCAAGGCCCGGATGCTGGTGTGGCTGTTAGAGACGACGACCGGCGACCTCGACGAGTTGAACCTAAACGCCCAGCAGGCGGCCTACTTCATTGAGGTTCGCCACCGCGGGGTACGGACCCTCAACAAGCAGTCGCCCTTTTACCAGGATGACTTTCTGGTTCGCCGGGCGCGCCAGGTGGCCACGGCTAACCTAATCATCACCAACCACGCCTACTTGGTTGCCCACCCCGCTGAACTGGGTGGCGACGATCGGGGCGCCTTTTTGGTCGTTGACGAGGCCCAGCACCTGAGCCGGGCGGTCCTCCGTCAATCGCGGCAGACCCTGACCTTCGCGCGGGTGATGATGATCCTCCACCAGCTCCAAAACCTGGTCAACCAGACCGGGGAGCAGAACCTGGTAACCCTGTTTGAAAACCTTCCCCTGGGTGCTTACAACGTCGAGTTACTAGCGAGCGATCTGCGCGAACTCGAGGGGCGCCTGGTGGACTTTCAACAGGCCCTCTATGGCCTGGTAAAGGGGGGCCAAGATGGGGAATTGGTTGAACAGGCCATCGACAACCGCCAGTTAGCTGGGATGCTAGCCCCGACCAACCCGCTAATGGTCGGGCTAGAGCAGGCCCTGTCGGCGATTAACCTCCACTTCACCGCCCTAAACCACCTCTTTTCCTCCCGCAGCGAAACTTGGTTGGCGACCGATCGTTACCTAATGACCCAGTTTGCGAGCCAGCTGGCCGGGTTGAAGGAAGCCACCAGGATGATTAAGGAGGCTGGTCAGCTCCTGGCTAGCCAACCGGAGGCCTGCGTCTTCTGGTTGACGATTCGTCAGGGGGACGAGCAAAGCACCCTCAAGCTGTCCGGGGGCCTCTTGGTAGCTAACCACTACCTGAGCCGCGAGGTTTACCCCCACTTTTTGAACCACCTCTTCGTCGGGGCGACCCTCTTTACCTCGGGGCGGTCGGCCTACATTTTTAACCAGCTCGACCTCGATCGCAAGCAGGTCCGGGTGAAACGCTTCGCATCACCCTTTGACTACGGGCAAAACGCCCGCCTCTTCGTGGCCAAGGATGCGCCAGCACCGGGCGCCACGGCGGGCGAGGATTACATTGATTACCTGGCCAAGATGATTTACCAACTGGCCACCAAGACCCAGTGCCAAACGATGGTCTTGTTCAACTCCCTTCTAACGATCGAACAGGTCTACGCTAAGTTGCGTAACACCGACCTCTTTAACCAACGCGACATCTTGGCCCAGGGGATCTCGGGTAACCGGGAAAAGCTTTTGAAGCAGTTTGCCACCGGCACCAATTCACTGTTGATGGGGGCGGCTAGTTTTTGGGAGGGGATTGACCTGCCTAAGGAACAACTGGAGCTCTTGGTCGTCACCCGGCTCCCCTTTGACTCCCCTAACGATGTGATTAACCGGGCCCAAAGCGCCCTCTTGAAGGCGGCCGGCAAGAATCCGTTTTACCAAGTGGAACTGCCGAAGGCCACCACGCGCTTACGCCAGGGGCTGGGGCGGCTCTTGCGGACCCCGCAGGACCGGGGGGTAGCGGTTGTCTTGGACCCCCGCCTCGTCACCAAGCGTTACGGTAAAACCATCCAGGCAGCCTTGCCGAGTGATCTGCCGGTGATCGCCGAAAGTAGCGATTTGATCGTGGTAAAAACCAAAAAATTCCTAAAAGGTCCGGAATCGGCCACGAACGAGTGA

Protein sequence:

MVSLAKKKRRGPVYAVVDLETTGTSVKTGSRIIQIGCVLVQDGQVINEFETKINPRTVVPLTIEQLTGIKNNDVKDAPLFEDVAPTLKSLLDDTIFVAHNVNFDFPFLNAEFERAGEAPLTIPAIDTVTLSQILMPTAPSFRLRDLTSYLAIDHDQPHSAVSDAVATAHLLIELLKRLADLPTITLQSIVDLQLTLPQKTAWLFERELAKRAVEPQPLKEELYVSNGLVLHKVRPVSVPTAQVAGKYPATKRQKKYLFGDDLAYRPLQSKMMNAIYNQFSQDEPVRQLVLEAGTGTGKTLGYLLPLAYLTYPDHRIVVSTATNLLQQQVAKQTVAILNDHLPFQLTAVVVKGNDHYLSIDRFAHSLAVHEDSQLAQALKARMLVWLLETTTGDLDELNLNAQQAAYFIEVRHRGVRTLNKQSPFYQDDFLVRRARQVATANLIITNHAYLVAHPAELGGDDRGAFLVVDEAQHLSRAVLRQSRQTLTFARVMMILHQLQNLVNQTGEQNLVTLFENLPLGAYNVELLASDLRELEGRLVDFQQALYGLVKGGQDGELVEQAIDNRQLAGMLAPTNPLMVGLEQALSAINLHFTALNHLFSSRSETWLATDRYLMTQFASQLAGLKEATRMIKEAGQLLASQPEACVFWLTIRQGDEQSTLKLSGGLLVANHYLSREVYPHFLNHLFVGATLFTSGRSAYIFNQLDLDRKQVRVKRFASPFDYGQNARLFVAKDAPAPGATAGEDYIDYLAKMIYQLATKTQCQTMVLFNSLLTIEQVYAKLRNTDLFNQRDILAQGISGNREKLLKQFATGTNSLLMGAASFWEGIDLPKEQLELLVVTRLPFDSPNDVINRAQSALLKAAGKNPFYQVELPKATTRLRQGLGRLLRTPQDRGVAVVLDPRLVTKRYGKTIQAALPSDLPVIAESSDLIVVKTKKFLKGPESATNE

GenBank Info

locus_tag - FAM19471-i1-1.1_001254
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003683266.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ATP-dependent DNA helicase
protein_id - extdb:FAM19471-i1-1.1_001254

Gene Locus

Located on scaffold FAM19471-i1-1_scf24

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_001253
FAM19471-i1-1.1_001255