locus tag:
FAM19471-i1-1.1_001347
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000632 |
glucosaminidase domain-containing protein |
|
|
Gene Product
|
LysM peptidoglycan-binding domain-containing protein |
|
|
|
KEGG gene
|
K19223 |
lytF, cwlE; peptidoglycan DL-endopeptidase LytF [EC:3.4.-.-] |
|
|
KEGG gene
|
K02395 |
flgJ; peptidoglycan hydrolase FlgJ |
kornec02040 |
|
KEGG gene
|
K01185 |
E3.2.1.17; lysozyme [EC:3.2.1.17] |
|
|
Eggnog Ortholog
|
EO:COG1388 |
|
|
|
Eggnog Description
|
ED:Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase |
|
|
|
EC Number
|
EC:3.2.1.17 |
lysozyme; muramidase; globulin G; mucopeptide glucohydrolase; globulin G1; N,O-diacetylmuramidase; lysozyme g; L-7001; 1,4-N-acetylmuramidase; mucopeptide N-acetylmuramoylhydrolase; PR1-lysozyme |
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec02040
|
Flagellar assembly |
Sequences
Nucleotide sequence (GC-content: 55.0 %):
ATGCACAAAAAGCAATCAAATGACCAATGCCTCCACTACAAAATGTACAAAAGCGGCCGCAAGTGGATGTTTGCTGGGGTTGCAGCTCTGACCCTGCTAACAACGACTGAAGTGGCTCACGCTGACACCACGTCTTCTTCAGCTGCCTCCACGGTCAGCCTCAACGGTTCAACCGTTGCCAGTGAAGCGGCTAAGGCCACCGTTACCTTTATTTCAGAAAGTACCAGCGCCACTAGTTCTAGCTCAAGCACGGCTAGCTCTTCTAGCTCTGCTACCTCCGCTAGTTCTAGTTCCGTGGCCACGGCAGCTACTAGCGTAACCAGTGCCACCAGCGCTACTAGCGCCACCTCGGTATCGTCAACGAGCGCTGACAGCTCCGCCAGTGCCGCTACGTCTAGCGATGACGCCAGCTCCTCGGCCAGCGCGGCGGATGCCAACAGCGGCGTTTCCTCCGCTAGTGCCGCCACCAGTGCTACGTCAGCAAGCTCTACTACTGTGGTCCGGGCGGTGGTTGCCGTGGCCACTAGCGCTAGTGCAAGTTCTTCGTCCGTTGACCTGTCAACGTTAACCTTCTCCAACAACGCCTCCCAACAGGCCTTCATCGAAAGCGTGGCTGAAGGGGCGATCGAAGGTTGGAACGAATACGGCGTCTTGCCGTCGATCACCGTTGCCCAGGCCATTCTCGAATCCGGTTGGGGTTCATCCACCCTTTCCACGCAAGCCCACAACCTCTTCGGGATTAAGGGGAGCTACAACGGTAACTACGTCACGATGAGCACCCGCGAAGTGATTAATGGGCAAAGCGTCTACGTTAACGCCGCCTTCCGGGCTTACGCTAACAACTCCGAATCCGTTGAAGACCACGGGAACTTCCTCTACTCCAACTCCCGTTACAGCAACCTCTTAGGTGACACTAGTTACACCGACGTCGCCCAAAAGCTTTCCCAAGACGGTTACGCTACCGACCCTTACTACTCTTCCTCTTTGATCAGCTTAGTTAAGACCTACGACCTGACCCAATTGGACAGCATCGCCATTGCGAACACGCCGGTGATCACCAACAAGAGCGATTACACCCAAACCAACAACGGGGCATCCACCACGGCGACGGCAACTTACTACACCGTCCAATCCGGCGACACCCTGTCCGGAATCGCCGTTGAATACAACACGACCACCGCGACGTTAACGAGTTTAAACAACTTATCCAACCCGAACTTGATCTACGTTGGGCAACGGCTCCTGGTCAAGAGCGCATCGACTGCAGCGGCGTCATCCGCAACTTCAACGGCCACCAGCACCGCTAGCGCAACTAGTACCAGCTCCACCACTAGTGCCACTACCTACACGGTCAAGTCTGGTGACACCCTCAGCTCGATTGCTAGCTCCCACAACACGACCACGGCGGCGTTGACGAGCTTAAACAGCCTGGCCAACCCGAACCTGATTTACGTGGGCCAAGTCCTTAAGTTGGCTAACACCACGACGGCAAGCACGAGTTCCACCAGCAGTGCCGCTTCAACTAGCTCAAGCGCAATGACTTACACGGTTAAGTCCGGTGATACCCTGAGTTCGATCGCCAGTTCCTACAACACGACCACCTCGACGTTGACGAGTTTGAACAACTTATCCAACCCGAACTTGATCTACGTGGGCCAAGTCCTCAAGGTAGCCGGCTCCTCTACCAGTGTTTCTACCAGCACTAGTTCTAGTTCGGCTAGCCAAGCAACGACCAGTGGTACCTACACGGTTAAAGCCGGCGATACCCTCAGTTCGATCGCTAGCTCCTACAACACGACTACGGCGGCGTTAGCTAGTGCCAACAGCATTTCCAACGCCAACTTGATCTACGTAGGCCAAGTCCTCAAGGTCACTGGCACTTCTTCAAGCACCAGCACCACCACTAGTTCCACTTCCTCAACCAGTGGTTCTTACACCGTTAAGTCCGGCGACTCGCTTTCCGCCATTGCCGCCGCTCACGGCTTAAACTGGAAGACGTTAGCCGCCAAGAACAACATCGCTAGCCCATACGTGATCTACGTTGGTCAACAGTTATCGCTTTAA
Protein sequence:
MHKKQSNDQCLHYKMYKSGRKWMFAGVAALTLLTTTEVAHADTTSSSAASTVSLNGSTVASEAAKATVTFISESTSATSSSSSTASSSSSATSASSSSVATAATSVTSATSATSATSVSSTSADSSASAATSSDDASSSASAADANSGVSSASAATSATSASSTTVVRAVVAVATSASASSSSVDLSTLTFSNNASQQAFIESVAEGAIEGWNEYGVLPSITVAQAILESGWGSSTLSTQAHNLFGIKGSYNGNYVTMSTREVINGQSVYVNAAFRAYANNSESVEDHGNFLYSNSRYSNLLGDTSYTDVAQKLSQDGYATDPYYSSSLISLVKTYDLTQLDSIAIANTPVITNKSDYTQTNNGASTTATATYYTVQSGDTLSGIAVEYNTTTATLTSLNNLSNPNLIYVGQRLLVKSASTAAASSATSTATSTASATSTSSTTSATTYTVKSGDTLSSIASSHNTTTAALTSLNSLANPNLIYVGQVLKLANTTTASTSSTSSAASTSSSAMTYTVKSGDTLSSIASSYNTTTSTLTSLNNLSNPNLIYVGQVLKVAGSSTSVSTSTSSSSASQATTSGTYTVKAGDTLSSIASSYNTTTAALASANSISNANLIYVGQVLKVTGTSSSTSTTTSSTSSTSGSYTVKSGDSLSAIAAAHGLNWKTLAAKNNIASPYVIYVGQQLSL
GenBank Info
locus_tag - FAM19471-i1-1.1_001347
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639625.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - LysM peptidoglycan-binding domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_001347
Gene Locus
Located on scaffold FAM19471-i1-1_scf28
FAM19471-i1-1.1_001346
