update range to 10000 bp
locus tag: FAM19471-i1-1.1_001357 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001703 DNA-3-methyladenine glycosylase
KEGG gene
 K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] kornec03410
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140097 catalytic activity, acting on DNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0019104 DNA N-glycosylase activity
Gene Ontology
 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds
Gene Ontology
 GO:0016798 hydrolase activity, acting on glycosyl bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006284 base-excision repair
Gene Ontology
 GO:0006281 DNA repair
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0003905 alkylbase DNA N-glycosylase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:yxlJ
Eggnog Ortholog
 EO:COG2094
Eggnog Description
 ED:Belongs to the DNA glycosylase MPG family
EC Number
 EC:3.2.2.21 DNA-3-methyladenine glycosylase II; deoxyribonucleate 3-methyladenine glycosidase II; 3-methyladenine DNA glycosylase II; DNA-3-methyladenine glycosidase II; AlkA
Gene Product
 DNA-3-methyladenine glycosylase

Occurs in the following pathway maps:

Pathway Description
kornec03410 Base excision repair

Sequences

Nucleotide sequence (GC-content: 58.4 %):

ATGTCACCATACCAAGCCTTTTTCACGAATCGCCCCACCGAAGAGATCGCCAAGGACCTCTTGGGGCGTGAACTCAGTTACCAAAGCCCCGCGGGGAGAGTGGCGGGCTTGATTGTTGAAACCGAGGCGTACTTGGGTGAGCAGGATTCGGCTTCCCACGCCTACAACGGGCGGCGGACCAACTATTCCGAGGCCCTGTACGGGGCGCCAGGAACGATCTACGTCTACCAAATCCGGGCTCACTACTGCTTTGACGTGGTCGTGCAAGACCAAGAAGAACCCCAGGGAATTTTGATTCGGGCACTAGAGCCCACGGAGGGGCTTGAATTAATGGAGGAGCGCCGTCATCAGGTCGGGGTGAACTTAACTAACGGGCCCGGCAAGGTTGGGCAGGCCCTGGGGTTAGTGGATCGCCACTTAGATGGTCAGCCGCTAGAAACGGCGCCGCTTTCGATTGATTTAACCAAGCGGCGGGCGCCCCAATCGATTGGGGTCAGTTCCCGGGTGGGGGTCAACCAAAGGGGGAGCCACGGTAACGCCCCGTTGCGCTTCTTTGTCGACCACAACCCCTACGTTTCCAAGATGCTAAAGCGCGATTCCGACCTGGTTAACCACGGATGGGGGGATTGA

Protein sequence:

MSPYQAFFTNRPTEEIAKDLLGRELSYQSPAGRVAGLIVETEAYLGEQDSASHAYNGRRTNYSEALYGAPGTIYVYQIRAHYCFDVVVQDQEEPQGILIRALEPTEGLELMEERRHQVGVNLTNGPGKVGQALGLVDRHLDGQPLETAPLSIDLTKRRAPQSIGVSSRVGVNQRGSHGNAPLRFFVDHNPYVSKMLKRDSDLVNHGWGD

GenBank Info

locus_tag - FAM19471-i1-1.1_001357
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391796.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DNA-3-methyladenine glycosylase
protein_id - extdb:FAM19471-i1-1.1_001357

Gene Locus

Located on scaffold FAM19471-i1-1_scf28

FAM19471-i1-1.1_001356
FAM19471-i1-1.1_001358