update range to 10000 bp
locus tag: FAM19471-i1-1.1_001365 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 transcription elongation factor GreA
Ortholog
 N0.HOG0000837 transcription elongation factor GreA
KEGG gene
 K03624 greA; transcription elongation factor GreA
Gene Code
 greA
Eggnog Protein
 EP:greA
Eggnog Ortholog
 EO:COG0782
Eggnog Description
 ED:Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through

Sequences

Nucleotide sequence (GC-content: 58.8 %):

ATGGCTAAGATTTACTACCAGGAGATGACGCCGGCGGGCTACCGGGCCATCGAAGAACAAATCGAAGCACTCAAACAAAAGCGACCGACCCTGATCGCCCGTCTAAAGGCGGCCCGCGCCCTGGGTGACCTCTCGGAAAACACCGAGTACTCAACGGCCAAACGGGAGCTGCGCCACTTAGAAAGCTGCCTGCGCTACCTCGACAAGCAGCTAACCTACGCTAAGGTGATTGACGTCTCAGACGACGGCAAGGTGGCCCTAGGGAAAGTGGTCACGATCCGCTTTTTGGACGACCAAGAAGAGGCGACCTACCAAATCGTGGGGCGCCACCAGGCCGAACAGGCTTCCTTAACTGAAGAGGTTTTGGCCTTCGACTCCCCCCTGGGGCTAGCCCTCAAGGGGCACACCGCCGGTACCACCGTGACCGTCCACGCCCCAGCGGCCAGTTACCAAGTCACCATCATCGCCGTAAAGGTGAAGTAA

Protein sequence:

MAKIYYQEMTPAGYRAIEEQIEALKQKRPTLIARLKAARALGDLSENTEYSTAKRELRHLESCLRYLDKQLTYAKVIDVSDDGKVALGKVVTIRFLDDQEEATYQIVGRHQAEQASLTEEVLAFDSPLGLALKGHTAGTTVTVHAPAASYQVTIIAVKVK

GenBank Info

gene - greA
locus_tag - FAM19471-i1-1.1_001365
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682220.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - transcription elongation factor GreA
protein_id - extdb:FAM19471-i1-1.1_001365

Gene Locus

Located on scaffold FAM19471-i1-1_scf28

FAM19471-i1-1.1_001364
FAM19471-i1-1.1_001366