update range to 10000 bp
locus tag: FAM19471-i1-1.1_001368 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 transporter substrate-binding domain-containing protein
Ortholog
 N0.HOG0000219 ABC transporter substrate-binding protein
KEGG gene
 K02424 fliY, tcyA; L-cystine transport system substrate-binding protein kornec02010kornec02040
Eggnog Protein
 EP:tcyA
Eggnog Ortholog
 EO:COG0834
Eggnog Description
 ED:Belongs to the bacterial solute-binding protein 3 family

Occurs in the following pathway maps:

Pathway Description
kornec02010 ABC transporters
kornec02040 Flagellar assembly

Sequences

Nucleotide sequence (GC-content: 51.6 %):

ATGAAGAAGTGGATGAAACGATTGAGTGTGGTCGCTGCTAGCCTGGTTGCTATGGTGGCATTAGCGGCCTGTGGGAAGAGCAACTCATCGTCTAGCGAGCCCCAACTGGTAACTAAGGGGACGTTGACGGTCGGGCTGGAAGGAACCTACGCCCCGTACTCCTACCGGGAAAACGGTAAGTTAACCGGGTTTGAAGTTGATCTGGCCCGCGACCTGGCAAAGAAGATGGGTTACAAGGTGAAGTTTGTTCCGACTAAGTGGGACTCCTTGATTGCCGGGGTCGGCTCCAAGAAGTTTGACGTGGCCATCAACGACATTGCTATGACGCCGGAACGCCAAAAGTCTTACTTATTCTCAACGCCGTACATTTACTCCAAGTCGGCATTGATTATGAAGTCTGACAACACCACGATTAAGAGTATCGATGACATCAAGGGCAAGAAGATTGCCGCCGCCACGGGAACGGCTAACGCCCAAAACGTGAAGAAGTTCGGCGGGGAGACGGTGTCATCCACCGACTTCTCCACGGCCATGGAACTGGTTCGCCAAGGGCGGGCCGAAGCAGCCTTGAACTCTAAGGAAGCCTTCTTGTACTACCAAAAGTCCACCGGGGCAACTGACCTCAAGTACCAAGAAGTTCCGTCATCTAAGATCCCAGTTCAAAAGATTGGGGTCCTGATGGCCAAGAACAACAAGGGCTTGCAAACCAAGGTCAACAAGGCCTTAGCTGAATTACGTAAGGATGGCACGCTCAAGAAGCTGTCCGAAAAGTACTTCCACGGTAACATTACTGATAAGTAA

Protein sequence:

MKKWMKRLSVVAASLVAMVALAACGKSNSSSSEPQLVTKGTLTVGLEGTYAPYSYRENGKLTGFEVDLARDLAKKMGYKVKFVPTKWDSLIAGVGSKKFDVAINDIAMTPERQKSYLFSTPYIYSKSALIMKSDNTTIKSIDDIKGKKIAAATGTANAQNVKKFGGETVSSTDFSTAMELVRQGRAEAALNSKEAFLYYQKSTGATDLKYQEVPSSKIPVQKIGVLMAKNNKGLQTKVNKALAELRKDGTLKKLSEKYFHGNITDK

GenBank Info

locus_tag - FAM19471-i1-1.1_001368
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003685553.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - transporter substrate-binding domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_001368

Gene Locus

Located on scaffold FAM19471-i1-1_scf28

FAM19471-i1-1.1_001367
FAM19471-i1-1.1_001369