locus tag:
FAM19471-i1-1.1_001383
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0004255 |
DUF2252 domain-containing protein |
|
|
KEGG gene
|
K13730 |
inlA; internalin A |
kornec05100 |
|
Eggnog Ortholog
|
EO:COG4320 |
|
|
|
Eggnog Description
|
ED:Uncharacterized protein conserved in bacteria (DUF2252) |
|
|
|
Gene Product
|
DUF2252 domain-containing protein |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec05100
|
Bacterial invasion of epithelial cells |
Sequences
Nucleotide sequence (GC-content: 58.8 %):
ATGCTCGTTACCGATCTCTTCAACCAAAACCAGCTCAGCCCCCACCTCTCCAAGCAGGCCCTCTTTGACCTGGGGGTGGCGCGCCAGCAGGCCGTTCCGAGCCGCGAACTGGCCGCCTACGTGCCGGTCGATCGCAACCCCTTGGACCTGATTGCGGCGACCGAATCGCAGATGCTCCCCGACCTCTTGGCGCTGCGCCACCAGCGAATGGGCGTCTCGCCCTTTACATTCTTTCGTGGCACCGCCGAGCTGATGGAACACGACCTAGCCGAACAGAGCCACAGCGGCATCCAAGTGATCATTTCCGGCGACGCCCACGTCAACAACTACGGCTTTTACGCCTCGCCGGAACGTAAGCTCTTGTTTGGCCTGAATGATTTTGACGAAGCCCGGATTGGTAACTGGGAAGACGACCTCAAACGCCTCTTGGTTTCCACCTACCTGGCTGGTCAGTCCAACGGCTTTTCGGAACGCGACCTCTTGCCGATCCTCACCAACGTAACCAGGACCTACCGCCACGGGGTCAAATACGCCAACGCCCTGACCTTGCCGGAGCGCTTCTACTTCTCCTACGAGATCCATGACATGATGGCGACGATCGACCGGATCAGCGACGATCAACCCCACAAGATCAGCACCATCTTGGAAAAGATTCTCAAGAAGAGTCCCCAGAAAAACTCCGAACAGGTCATCGCCAAGCTGACGACCGCGGATGAAGAGGGGCGCCGCTACTTTATCGAACAAGCGCCACGAGCCAAGCGTGTTCCCCAAGCCATCAAGGACCAACTGATCCGGGGCTACCACCGCTACTTGAAAAACACCCGCGAGGACGTCCGCGTTTACCTGACCAACTTTACCGTGGACGACGTGATCCGCTACGCCGTGGGGGTCGGCTCCTTTGGCACCCACTGTTACCTGATGCTGTTATCCGGCAACGACGGTAGCCACCTGGTCTTACAGATCAAAGAGGCCCTGCCGCTGCGGGCTAGCCTAACCAGCTTGAGCTCCGACCGTGACCTGCGGCTGGCCCAGGAACGCTCGGCCGGCCGTCGGATCGTCACCGCCCAAAAGACCCTCCAGTCGGCCTCCGATCCCTTCCTCGGGGCCTCCCACTTTGGCCACCGCTCCTATTACTTTCGCCAGTTCCGCGACATGAAGGAGTCGATCGACGTCGCCAAGCTCGACCTGGAGTCCTTTGGTATTTACACGGCCACCTGCGCCTTCTTGTTGGCGATTGCCCACTTCCAAAGCCCGACCGCCCCAATGATCGCGGGCTACTTGCACCACCAAAAACCAGTCGACGATACCCTGGCTGATTGGGCCGTTCAGTACGCCGGCCAAGTTAACCGTGATTACCAAATCTTTATCAATTACTAA
Protein sequence:
MLVTDLFNQNQLSPHLSKQALFDLGVARQQAVPSRELAAYVPVDRNPLDLIAATESQMLPDLLALRHQRMGVSPFTFFRGTAELMEHDLAEQSHSGIQVIISGDAHVNNYGFYASPERKLLFGLNDFDEARIGNWEDDLKRLLVSTYLAGQSNGFSERDLLPILTNVTRTYRHGVKYANALTLPERFYFSYEIHDMMATIDRISDDQPHKISTILEKILKKSPQKNSEQVIAKLTTADEEGRRYFIEQAPRAKRVPQAIKDQLIRGYHRYLKNTREDVRVYLTNFTVDDVIRYAVGVGSFGTHCYLMLLSGNDGSHLVLQIKEALPLRASLTSLSSDRDLRLAQERSAGRRIVTAQKTLQSASDPFLGASHFGHRSYYFRQFRDMKESIDVAKLDLESFGIYTATCAFLLAIAHFQSPTAPMIAGYLHHQKPVDDTLADWAVQYAGQVNRDYQIFINY
GenBank Info
locus_tag - FAM19471-i1-1.1_001383
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003681440.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DUF2252 domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_001383
Gene Locus
Located on scaffold FAM19471-i1-1_scf29
FAM19471-i1-1.1_001382
