locus tag:
FAM19471-i1-1.1_001394
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Eggnog Ortholog
|
EO:COG1061 |
|
|
|
Eggnog Description
|
ED:Helicase C-terminal domain protein |
|
|
|
Gene Product
|
DEAD/DEAH box helicase |
|
|
Sequences
Nucleotide sequence (GC-content: 52.3 %):
ATGCATCAAGATGTTAATTACGATCACTTATTGGATGAGTTAGGGACACAGGGGAGCCTGGCTAAGGAGATGGGCGCCTCCCTTTTGCATGGTTACGTTGACCAAGATGGGGTCCAACCAATTGGTGACTTCGGGCCTAAGCTATTAACGAACCAGTTTGATAACCAGATCTGGGACCAGCTGCGTTCAGAATTAAACGACGCGACGGAGTACGCCTTTGCGGTGGCCTTCGTGACCGACGCAATGGTCTCCAACCTCAAGCCGCTCTTTAGAACCTTGGCGGCCCGGGGAGTCAAGGGGCGGCTCTTGACGTCGACTTACCTGCAATTCAACCAGCCGGACATGTTTGAAGAACTACTTAAAATCGACAACTTAGAGGTCCGGATTGCCACCGTCAAGGGTTTTCACCAGAAGGGTTACCTCTTTAAGCACCGCGACTACCAAACGGTGATCATCGGTAGTGCTAATTTAACCGCCAGCGCCCTGATGAAAAACCAAAACTACGAGTGGAGTTTAAAGGTCAGTTCCCTGAATAACGGTGAGATCACCCGTCAAATCGAGGAAAACTTTGAGGCCGAATGGAGGGACGCCAAGCCGCTGAGTGAGGACTGGCTGGACGGCTACCGCAAGGCTTACCAAGCGGACCACCAAGTTAACAGGGCGGTGCACGATTACGTGACGCCGTCAGATGAGCCGGGGAAAGCGCAGCAGGTTAAGCCAAACCAAATGCAAACGGCGGCCCTAAATGAAATTGAGGCCCTGCGCCTGGCCGGCAAGGACCGCGGGCTGGTGGTGTCGGCGACTGGGACCGGGAAAACTTACCTGGGAGCCTTCGACGTTCGGGCGGCCAAGCCCAAGCGGATGCTGTTCTTGGCCCACCGGGAACAGATCTTGCAAAAGTCCTGCCAGAGTTTTAAAAATATTTTAGGTGGTGATCCGGATAACTTTGGCCTCTACACTGGTGGGGCCAGGGACAAGAACGCCAAGTACCTATTTGCCAGCGTTCAAACCCTGTCACGGGAGGAACACCTGCACCGCTTTTCCCCCGATGACTTTGATTACATTTTGATTGACGAGGTTCACCACGCCGGGGCGGAGAGCTACCAAAGGATCATGGACTATTTCACCCCAAAGTTTTTCTTGGGAATGACCGCGACCCCGGAACGCAGCGACGACTTTAACATCTTTAATCTCTTTCACTATAACGTCGCCTACGAAATTCGCCTCCAACAAGCCTTAGAGTTAAACATGCTGGCGCCCTTTCATTACGTGGGTTTGACCGACTACGCCTTTGCTGATCAATACGAAGAAGAAGTTGATCAGTACCGGAACCGCAAGCAGGGGAGCAAACCGTCGCGTAAGCAAGAGCAACGGGCGGTGGAATTGTTGACCAGTAAGGAACGGGTTAACTACATCCTGGAACAGACCGATTACTATGGCTATTCCGGCCCGGGCTTGCACGGCCTGGTCTTTTGTTCGTCGGTGGCCGAAGCTGAAGCGTTGGCGAGGGCCTTTACGGCTGCCGGCCACCCAGCCAAGGCCCTGTCTGGTGCCGATAATGGCGACCGCCGTCGCCAGGTGGTGCACGAACTAGAAAACGGACTTATCGAATACATCATCACGGTTGACATCTTTAATGAGGGAATCGACATTCCCTGCGTCAACCAGGTCGTTTTCCTACGTAACACCCAGTCGGCGATCGTCTACATTCAACAGCTGGGGCGGGGATTGCGCAAGTACCCGGGTAAGGAGTACGTCGAGGTCCTCGACTTCATTGGTAACTATAAAAATAACTACATGATCCCGATTGCTTTGACCGGGGATAATTCCTACTCCAAGGATCAGGCTCGCGATACCGTCGACATTGAACCAACCGTCGGCCTGTCGACGATCGCCTTTGACGAGGTGGCTAAGGAACGGATTTATGAGTCCTTAAGCAAGGTCAAACTAGACGGACTGGCTAACTTACGGGACGCCTACCAAAATATCAAGCGACGGGTGGGGCGAATCCCAATGCTCAGCGACTTTTTGAAGATGGATTCGGTCGATCCGCAGATCTTAGCGACGGTGGTCAAGCCCCGTAACTACAACCGTTTCTTGCTTAAGATGGGGGAGCCAGTTGAAGTAACTGACTACGAAGACCAGGCTTTGTCCCTTATCTCCGTTGAATTGTTAAACGGCAAGCGCCGCCACGAATTGATTTTGCTACGGTTATTACTACAACGTTCCGTGGTTAAGGAGGCAGATTACGTCAGGGAGCTCAAGGAGGCTGGCTGTTACGTCAACGAAGCCACCTTGAACTCGGTCCGGCAGGTGTTAAGCCTCCAGTACTACGCCGAAAGGGCCTACCCATCACGAGCTTCTTATGGGGGCGTTGCGCTGGTTAATTATGATCCAGACCAAAAAAACTACCAAATGGGGGAGCAGTTGGCCCAAGCCCTTACCAAGCGGGGCTGGTTTTACCAGCTGTGGTCTGATACGATCGAAACGGGCCTACTGCGGGCCGAACGCTACCAGGCCAACGAACAATTTACGATTGGGGAACGCTACACTAGGCGGGATGCCGTGCGTCTGATTAACAACCCTTACGATATGAACGGCCAGCTTGTGTCGGGTTATCGCTTCACCAGTGAAGAAACGGGGTTAAAAGAGGCGATTATCTTCGTCACCTACAAGAAGGCCAAAAATATTCGTAAGGAGATCAATTACAATAACCGCTTCATCAATGACCACGTTCTCCATTACTACACTAAGAATTCCGACATTAAGTTAGATTCGGCCAACGTGGTGAAGTTCATGGGGGGCGAATACAAGCTGCGGCTGTTCGTCCAGAAGTCGGGTGCCATCGATGAAACCGAATTTTACTACCTCGGGACTTGCCGTTACCTCAACAACAGCGTCCAAAAAGAAACCCAAGATGGGGTGCCGCGGTTGGCAATGGACCTTCTGTTGGATCACCCCGTTGAACATAACCGCTACCACACCTTTATCGATTAG
Protein sequence:
MHQDVNYDHLLDELGTQGSLAKEMGASLLHGYVDQDGVQPIGDFGPKLLTNQFDNQIWDQLRSELNDATEYAFAVAFVTDAMVSNLKPLFRTLAARGVKGRLLTSTYLQFNQPDMFEELLKIDNLEVRIATVKGFHQKGYLFKHRDYQTVIIGSANLTASALMKNQNYEWSLKVSSLNNGEITRQIEENFEAEWRDAKPLSEDWLDGYRKAYQADHQVNRAVHDYVTPSDEPGKAQQVKPNQMQTAALNEIEALRLAGKDRGLVVSATGTGKTYLGAFDVRAAKPKRMLFLAHREQILQKSCQSFKNILGGDPDNFGLYTGGARDKNAKYLFASVQTLSREEHLHRFSPDDFDYILIDEVHHAGAESYQRIMDYFTPKFFLGMTATPERSDDFNIFNLFHYNVAYEIRLQQALELNMLAPFHYVGLTDYAFADQYEEEVDQYRNRKQGSKPSRKQEQRAVELLTSKERVNYILEQTDYYGYSGPGLHGLVFCSSVAEAEALARAFTAAGHPAKALSGADNGDRRRQVVHELENGLIEYIITVDIFNEGIDIPCVNQVVFLRNTQSAIVYIQQLGRGLRKYPGKEYVEVLDFIGNYKNNYMIPIALTGDNSYSKDQARDTVDIEPTVGLSTIAFDEVAKERIYESLSKVKLDGLANLRDAYQNIKRRVGRIPMLSDFLKMDSVDPQILATVVKPRNYNRFLLKMGEPVEVTDYEDQALSLISVELLNGKRRHELILLRLLLQRSVVKEADYVRELKEAGCYVNEATLNSVRQVLSLQYYAERAYPSRASYGGVALVNYDPDQKNYQMGEQLAQALTKRGWFYQLWSDTIETGLLRAERYQANEQFTIGERYTRRDAVRLINNPYDMNGQLVSGYRFTSEETGLKEAIIFVTYKKAKNIRKEINYNNRFINDHVLHYYTKNSDIKLDSANVVKFMGGEYKLRLFVQKSGAIDETEFYYLGTCRYLNNSVQKETQDGVPRLAMDLLLDHPVEHNRYHTFID
GenBank Info
locus_tag - FAM19471-i1-1.1_001394
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391649.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DEAD/DEAH box helicase
protein_id - extdb:FAM19471-i1-1.1_001394
Gene Locus
Located on scaffold FAM19471-i1-1_scf29
FAM19471-i1-1.1_001393
