update range to 10000 bp
locus tag: FAM19471-i1-1.1_001403 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0000108 IS30 family transposase, partial
Gene Product
 IS30 family transposase
Eggnog Ortholog
 EO:COG2826
Eggnog Description
 ED:Transposase and inactivated derivatives

Sequences

Nucleotide sequence (GC-content: 42.3 %):

GTCAACTTCAAGGCAAGCTCAAGACGCTTACCGTAGACCATGGTAAAGAGTTCGCTAACTATCAGACAATTGAGCGGCGAACTGGTACACAGGTTTATTTTGCCCATGCCTATTCACCACATGAACGAGGCAGTAATGAAAATCGCAACCGAGTACTACGCCGCTTCATTCCCAAAGGTCAACCGATTGATGAGATTACCGATGATGAATTGATTCAAATTAACTGGTATTTGAATTGCCGACCACTCAAATGTTTAAATTGGCGAACACAGATTGAGATCTTTTTGCGTAATCTGCGTTACTAA

Protein sequence:

QLQGKLKTLTVDHGKEFANYQTIERRTGTQVYFAHAYSPHERGSNENRNRVLRRFIPKGQPIDEITDDELIQINWYLNCRPLKCLNWRTQIEIFLRNLRY

GenBank Info

locus_tag - FAM19471-i1-1.1_001403
inference - COORDINATES: similar to AA sequence:RefSeq:WP_013355080.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 3
transl_table - 11
product - IS30 family transposase
protein_id - extdb:FAM19471-i1-1.1_001403

Gene Locus

Located on scaffold FAM19471-i1-1_scf30

FAM19471-i1-1.1_001402
FAM19471-i1-1.1_001404