update range to 10000 bp
locus tag: FAM19471-i1-1.1_001418 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 serC
KEGG reaction
 R05085 O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase; O-Phospho-4-hydroxy-L-threonine + 2-Oxoglutarate <=> 2-Oxo-3-hydroxy-4-phosphobutanoate + L-Glutamate kornec00750kornec01100kornec01240
KEGG reaction
 R04173 3-Phosphoserine:2-oxoglutarate aminotransferase; O-Phospho-L-serine + 2-Oxoglutarate <=> 3-Phosphonooxypyruvate + L-Glutamate kornec00260kornec00270kornec00680kornec01100kornec01110kornec01120kornec01200kornec01230
Ortholog
 N0.HOG0001713 phosphoserine transaminase
KEGG gene
 K00831 serC, PSAT1; phosphoserine aminotransferase [EC:2.6.1.52] kornec00260kornec00270kornec00680kornec00750kornec01100kornec01110kornec01120kornec01200kornec01230kornec01240
Gene Ontology
 GO:1901607 alpha-amino acid biosynthetic process
Gene Ontology
 GO:1901605 alpha-amino acid metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046394 carboxylic acid biosynthetic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0016769 transferase activity, transferring nitrogenous groups
Gene Ontology
 GO:0016740 transferase activity
Gene Ontology
 GO:0016053 organic acid biosynthetic process
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009070 serine family amino acid biosynthetic process
Gene Ontology
 GO:0009069 serine family amino acid metabolic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008652 cellular amino acid biosynthetic process
Gene Ontology
 GO:0008483 transaminase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006564 L-serine biosynthetic process
Gene Ontology
 GO:0006563 L-serine metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004648 O-phospho-L-serine:2-oxoglutarate aminotransferase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:serC
Eggnog Ortholog
 EO:COG1932
Eggnog Description
 ED:Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
EC Number
 EC:2.6.1.52 phosphoserine transaminase; PSAT; phosphoserine aminotransferase; 3-phosphoserine aminotransferase; hydroxypyruvic phosphate-glutamic transaminase; L-phosphoserine aminotransferase; phosphohydroxypyruvate transaminase; phosphohydroxypyruvic-glutamic transaminase; 3-O-phospho-L-serine:2-oxoglutarate aminotransferase; SerC; PdxC; 3PHP transaminase kornec00260kornec00270kornec00680kornec00750kornec01100kornec01110kornec01120
Gene Product
 3-phosphoserine/phosphohydroxythreonine transaminase

Occurs in the following pathway maps:

Pathway Description
kornec00260 Glycine, serine and threonine metabolism
kornec00270 Cysteine and methionine metabolism
kornec00680 Methane metabolism
kornec00750 Vitamin B6 metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01200 Carbon metabolism
kornec01230 Biosynthesis of amino acids
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 59.4 %):

ATGCCAACCTACAACTTCGCCGCTGGCCCAGCCACCTTACCCCGGCCGGTGCTAGAACAAGTCCAACGAGAGCTCCTGGATTACCAGGGTAGCCAAGTAAGCATCCTAGAAATCTCCCACCGCTCGCCGGTCTTTCGAGAAATCTACCAGCAGGCCAAGGAACGGCTCTTGCAGTTGATGGGGCTGAGCGCCGACGAGTACACACCGCTCTTCTTGCAGGGTGGGGGGACCCTCCAGTTTACGATGGTGCCCTTAAACCTGGCCCGTGACCACCACCGGGTGGCCTACGCCGATACCGGGCACTGGTCGGCCCGGGCGATTGAAGAGGCGAAGAAGTTGCCGGACTTGACGGTTGACGTGGTCACCGAGGCCGGACCGGACTTCGCCCACATTCCGGCGGTGCCAGACCTACCAGCTGACACCTACGACTACCTTCACATCACCACCAACAACACGATCATGGGGCTGGCTTACCAGGACCTGCCGCAAACGGCGGTGCCGCTGGTCGGGGACCTGTCCTCCAACTTCTTGGGCCAGGCCTACGACTTTTCTTCCTTTGACCTAATCTACGCCGGCGCCCAGAAGAACCTGGCCCCGGCCGGGGTGACGATCGTGGTGGTCAAAAATGACTACCTAACGGAAGACCACGGCCTGCCAAGCATGCTCAATTACCCGGCCCTGGCCAAGAAGGAATCGGCCCTTAACACGCCGCCGGTCTTTCAAATTTACTTCGCCAACCTGGTCTTGAAGTGGTTAAAAGAACAGGGCGGGGTCCAGGCCATGGACGAGTTAAACCGCCAAAAGGCCGGCCTGGTTTACGATTACTTAGACCAGTCCAAGCTCTTCTCTAACCGGGTGGCGCCGGATTCAAGGAGCCTGACCAACATTCCCTTCACCACTGGGAAAGCCGACCTTGACCAGCGCTTCATCAAGGAAGCCGCCGCGGCCGGGTTGGTGAACTTAAAGGGCCACCGCTTAGTCGGCGGGATGCGGGCCAGCCTGTATAACGCCATGCCACTGGCCGGGGCCGTGGCCCTGCGTGACTTCATGCACCAGTTTGAACAAGAAATTTAG

Protein sequence:

MPTYNFAAGPATLPRPVLEQVQRELLDYQGSQVSILEISHRSPVFREIYQQAKERLLQLMGLSADEYTPLFLQGGGTLQFTMVPLNLARDHHRVAYADTGHWSARAIEEAKKLPDLTVDVVTEAGPDFAHIPAVPDLPADTYDYLHITTNNTIMGLAYQDLPQTAVPLVGDLSSNFLGQAYDFSSFDLIYAGAQKNLAPAGVTIVVVKNDYLTEDHGLPSMLNYPALAKKESALNTPPVFQIYFANLVLKWLKEQGGVQAMDELNRQKAGLVYDYLDQSKLFSNRVAPDSRSLTNIPFTTGKADLDQRFIKEAAAAGLVNLKGHRLVGGMRASLYNAMPLAGAVALRDFMHQFEQEI

GenBank Info

gene - serC
locus_tag - FAM19471-i1-1.1_001418
EC_number - 2.6.1.52
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003685121.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 3-phosphoserine/phosphohydroxythreonine transaminase
protein_id - extdb:FAM19471-i1-1.1_001418

Gene Locus

Located on scaffold FAM19471-i1-1_scf30

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM19471-i1-1.1_001417
FAM19471-i1-1.1_001419