update range to 10000 bp
locus tag: FAM19471-i1-1.1_001452 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 rfbA
KEGG reaction
 R02328 dTTP:alpha-D-glucose-1-phosphate thymidylyltransferase; dTTP + D-Glucose 1-phosphate <=> Diphosphate + dTDP-glucose kornec00521kornec00523kornec00525kornec00541kornec01100kornec01110
Ortholog
 N0.HOG0000767 glucose-1-phosphate thymidylyltransferase RfbA
KEGG gene
 K00973 rfbA, rmlA, rffH; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] kornec00521kornec00523kornec00525kornec00541kornec01100kornec01110
Gene Product
 glucose-1-phosphate thymidylyltransferase RfbA
Eggnog Protein
 EP:rfbA
Eggnog Ortholog
 EO:COG1209
Eggnog Description
 ED:Catalyzes the formation of dTDP-glucose
EC Number
 EC:2.7.7.24 glucose-1-phosphate thymidylyltransferase; glucose 1-phosphate thymidylyltransferase; dTDP-glucose synthase; dTDP-glucose pyrophosphorylase; thymidine diphosphoglucose pyrophosphorylase; thymidine diphosphate glucose pyrophosphorylase; TDP-glucose pyrophosphorylase kornec00521kornec00523kornec00525kornec00541kornec01100kornec01110

Occurs in the following pathway maps:

Pathway Description
kornec00521 Streptomycin biosynthesis
kornec00523 Polyketide sugar unit biosynthesis
kornec00525 Acarbose and validamycin biosynthesis
kornec00541 O-Antigen nucleotide sugar biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites

Sequences

Nucleotide sequence (GC-content: 42.2 %):

ATGAAAGGAATTATTTTGGCAGGTGGGTCGGGTACCCGTCTCTATCCAATTACGCGTGGTATTTCAAAGCAATTGATTCCGGTTTATGATAAGCCGATGATTTATTATCCTTTATCGACTTTAATGTTAGCTGGGATTAGGGATATTTTGGTGATCTCGACACCAGAATATTTGCCGCTATTTGAAGAATTATTGGGTGACGGGTCCAGTTTGGGCTTGAACTTCTCCTATAAGGTGCAAGACCAGCCAAATGGACTCGCCGAAGCTTTTATTCTCGGCGAAGATTTTATTGGTGACGATAGTGTTTGTTTGATTTTAGGAGACAATATCTATTATGGAGCTGGTCTGTCTGACTTAGTTCAATCAGCAGCGCAAAAAACGGATGGCGCCACGGTCTTTGGTTACCATGTCAATGATCCTGAACGTTTTGGCGTGGTCGACTTTGATGACCAGATGCATGCCTTATCGATTGAAGAAAAGCCGGCTCATCCCAAGAGTAATTATGCCGTGACTGGTCTGTACTTCTATGATAACCAAGTAGTTGATATTGCTAAAAACATCAAGCCATCGGATCGCGGCGAACTTGAAATTACTGATGTTAATAAGGAATACCTGCGTCAAGGCAAGCTCGATGTTAAGTTAATGGGGCGTGGTTATGCTTGGTTAGATACCGGTACGCACGCTTCAATGCTCGAAGCAGCCAATTTCATCGCCACGATTGAAAAACGCCAAAACTTAAAAGTGGCTTCCTTAGAAGAAATTGCTTATCGGATGGGTTACATTAATAAGGACCAGTTAGTTGAACTTGCTCAACCATTAAAGAAGAATGACTATGGTCAATACTTATTACGGTTAGCACAACAGGACTAG

Protein sequence:

MKGIILAGGSGTRLYPITRGISKQLIPVYDKPMIYYPLSTLMLAGIRDILVISTPEYLPLFEELLGDGSSLGLNFSYKVQDQPNGLAEAFILGEDFIGDDSVCLILGDNIYYGAGLSDLVQSAAQKTDGATVFGYHVNDPERFGVVDFDDQMHALSIEEKPAHPKSNYAVTGLYFYDNQVVDIAKNIKPSDRGELEITDVNKEYLRQGKLDVKLMGRGYAWLDTGTHASMLEAANFIATIEKRQNLKVASLEEIAYRMGYINKDQLVELAQPLKKNDYGQYLLRLAQQD

GenBank Info

gene - rfbA
locus_tag - FAM19471-i1-1.1_001452
EC_number - 2.7.7.24
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003715755.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - glucose-1-phosphate thymidylyltransferase RfbA
protein_id - extdb:FAM19471-i1-1.1_001452

Gene Locus

Located on scaffold FAM19471-i1-1_scf31

FAM19471-i1-1.1_001451
FAM19471-i1-1.1_001453