locus tag:
FAM19471-i1-1.1_001457
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0004014 |
IS30 family transposase, partial |
|
|
Gene Product
|
IS30 family transposase |
|
|
|
Eggnog Ortholog
|
EO:COG2826 |
|
|
|
Eggnog Description
|
ED:PFAM Integrase catalytic region |
|
|
Sequences
Nucleotide sequence (GC-content: 47.8 %):
ATGACCTACTCTCATCTTACCACAGCTGAACTCACTACAATCGCAAATTTCTTCACTCAGGGAACGAAAGCCGACAAGGTGGCGCAAATGCTTAAGCGGAGTGTTGAGACGATCTACCGTGTCTATCGCTATCTGAAGACCGGGGCAACGATTGTCGATTACCAACAACAGTACGTAAGCAATAGGAAGCGTTGTGGTCGTAAGCTAGCCCAATTACCGCAGGATGAGGTTGCCTACATCAATGAGATGGTTGCACAAGGTTGGACACCTGACACCATCATTGGGCGTGGCGACCGATCGATTAGTTGTAATCGACGGACTCTTTACCGGATGTTTAAACGGGGTCAGTTTGGCTTTGACGCTAAGGATTTACCAATGCACGGTAATCGTCACCCTAATGGCTATGTGGAACATCGTGGAAAGGCTGGTCAATTAGGTCGGAGTATCTACGAGCGCTATGAAGATTTTCCCAACTACACTAAGGAGTTTGGCCATCTCGAAGGTGATACCGTTCAAGGTAAGCACCATCAAGGGGCGGTTATGACCTTAGTTGAGCACTTATCTAAGGTCGAAATTGTCCTAAACGTTCACGCTAAGAAGGCTGAGAACATCAACCGCCACCTAAGTGAATGGTTAAGTAAGTTTCCGCGCCACTTCTTCAAGTCGATCACCTTTGACAACGGGAAGGAGTTCGCTGGGTGGTGGGAGATTGCCAACCAATTTGACATCCACACCTACTTCGCCGAGGTTGGTGCCCCAAATCAACGGGGGCTCAACGAGAACAACAATGGCCTTCTTCGCCGCGACGGCTTGACCAAGGATCGTGACTTACGCAACCTTCCAGATGAGTTAGTGAACCAGCTCATGAGTAAGCGGAATCGAATTCCAAGAAAGTCACTAGACTATCGGACACCTTATGAGGTATTTATGGAACATATCACAGAGGATCAACGACAACTTTTTTTCTAA
Protein sequence:
MTYSHLTTAELTTIANFFTQGTKADKVAQMLKRSVETIYRVYRYLKTGATIVDYQQQYVSNRKRCGRKLAQLPQDEVAYINEMVAQGWTPDTIIGRGDRSISCNRRTLYRMFKRGQFGFDAKDLPMHGNRHPNGYVEHRGKAGQLGRSIYERYEDFPNYTKEFGHLEGDTVQGKHHQGAVMTLVEHLSKVEIVLNVHAKKAENINRHLSEWLSKFPRHFFKSITFDNGKEFAGWWEIANQFDIHTYFAEVGAPNQRGLNENNNGLLRRDGLTKDRDLRNLPDELVNQLMSKRNRIPRKSLDYRTPYEVFMEHITEDQRQLFF
GenBank Info
locus_tag - FAM19471-i1-1.1_001457
inference - COORDINATES: similar to AA sequence:RefSeq:WP_006499680.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - IS30 family transposase
protein_id - extdb:FAM19471-i1-1.1_001457
Gene Locus
Located on scaffold FAM19471-i1-1_scf31
FAM19471-i1-1.1_001456
