update range to 10000 bp
locus tag: FAM19471-i1-1.1_001495 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001307 chromosomal replication initiator protein DnaA
KEGG gene
 K02313 dnaA; chromosomal replication initiator protein kornec02020kornec04112
Gene Ontology
 GO:1990837 sequence-specific double-stranded DNA binding
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043565 sequence-specific DNA binding
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0042802 identical protein binding
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006270 DNA replication initiation
Gene Ontology
 GO:0006261 DNA-templated DNA replication
Gene Ontology
 GO:0006260 DNA replication
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0005515 protein binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0003690 double-stranded DNA binding
Gene Ontology
 GO:0003688 DNA replication origin binding
Gene Ontology
 GO:0003677 DNA binding
Gene Ontology
 GO:0003676 nucleic acid binding
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:dnaA
Eggnog Ortholog
 EO:COG0593
Eggnog Description
 ED:it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
Gene Code
 dnaA
Gene Product
 chromosomal replication initiator protein DnaA

Occurs in the following pathway maps:

Pathway Description
kornec02020 Two-component system
kornec04112 Cell cycle - Caulobacter

Sequences

Nucleotide sequence (GC-content: 53.6 %):

TTGACTGAGCTCGATTCTCTTTGGGAAGCGATCCAAAATTCATTCCGTAAGTCTAAGGGCGATACGACTTACAAAAACTTAATTGCTCCGGCAAAACCCCTCGACTTCGCTAACGGCAGGCTTCGCATCCAGCTGCCCTCCCAGTACCACCGCGACTTTTGGGAGCAGCTGACCGACCAGGTCGTCGAAATCGTCTACCAACGCACCGGCCAAGAAATTCGCCCGGACTACGTGTTGGCAACCGATCCGACCCCCCTGGCCCAAACGCCGCCCCGGCCACAGTCGACCTTTAAAGAGGAAACGCCCCTCAACCCGGAGTACACCTTCCAAACCTTCATTGAAGGACGTAGCAACATGATGGCCTACGCTTCAGCCTTTGCGGCTTCCGAGTCCCCGGGTGACCAGTACAACCCGCTCCTGATTTACGGGGGCGTCGGCCTAGGCAAGACCCACTTGATGCAAGCCATCGCTAACAACATGAAGTTTCACAACCCTAGCGTACGGATCAAGTACGTAACCAGCGAAAACTTCATGAACGACTTCGTTAACTCTATTAAATCCGGGACCCAAGAGGAGTTCCGCCGCGAATACCGCGACCTCGACGCCCTCTTGGTCGACGATATTCAGTTCTTCGCCTCCAAGGGGGAGACGCAAACCGAATTTTTCAATACCTTTAACGTCTTATACGACAACAAAAAGCAGATTGTCCTGACCTCCGATAAGGATCCCCGCGAAATCCCCAACCTGACGGCACGGTTGGTCTCCCGCTTCATGTGGGGGGTCCCGGTCGAAATTACCTCGCCGGCACTGGAAACCCGGATTGCGATTTTAAAGTCCAAGGCTGAAGAAGAGCACCTCGACGTGCCAAACGACGTCTTAAACTTCGTTGCCCAACGCATCAACACCAACGTCCGCGAATTAGAAGGGGCCCTGATGAGAATCCGGGTCTTTTCCGAACTCCACCAGCAACCGATTACCCTCAAACTGGCTACCGAGGCCCTGCAGGGAATGGTTGCCAACACCGAAACGACGGTCACCATTGACCTAATTCAAAAGCGTGTCGCCACCTATTACAACATTAACCAATCCGACATTACCGGCAAAAAGCGGACCAAAAACATCGTCGTTCCCCGCCAGATTGCCATGTACCTGTCCCGGGAGTTAACCGATAATTCCCTACCAAAGATCGGTAAAGAATTCGGCGGCAAGGACCACACCACCGTACTGCACGCCATCGATAAGATCGAAAGGCAGGTTCAAGAAGACGCCCGCCTGCAGGGGGACTTGGTTAAGCTCAAAAACGACCTGCAAGCCTAG

Protein sequence:

MTELDSLWEAIQNSFRKSKGDTTYKNLIAPAKPLDFANGRLRIQLPSQYHRDFWEQLTDQVVEIVYQRTGQEIRPDYVLATDPTPLAQTPPRPQSTFKEETPLNPEYTFQTFIEGRSNMMAYASAFAASESPGDQYNPLLIYGGVGLGKTHLMQAIANNMKFHNPSVRIKYVTSENFMNDFVNSIKSGTQEEFRREYRDLDALLVDDIQFFASKGETQTEFFNTFNVLYDNKKQIVLTSDKDPREIPNLTARLVSRFMWGVPVEITSPALETRIAILKSKAEEEHLDVPNDVLNFVAQRINTNVRELEGALMRIRVFSELHQQPITLKLATEALQGMVANTETTVTIDLIQKRVATYYNINQSDITGKKRTKNIVVPRQIAMYLSRELTDNSLPKIGKEFGGKDHTTVLHAIDKIERQVQEDARLQGDLVKLKNDLQA

GenBank Info

gene - dnaA
locus_tag - FAM19471-i1-1.1_001495
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682297.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - chromosomal replication initiator protein DnaA
protein_id - extdb:FAM19471-i1-1.1_001495

Gene Locus

Located on scaffold FAM19471-i1-1_scf33

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM19471-i1-1.1_001494
FAM19471-i1-1.1_001496