update range to 10000 bp
locus tag: FAM19471-i1-1.1_001522 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 type II toxin-antitoxin system PemK/MazF family toxin
Ortholog
 N0.HOG0003719 type II toxin-antitoxin system PemK/MazF family toxin
KEGG gene
 K07171 mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]
Eggnog Protein
 EP:ndoA
Eggnog Ortholog
 EO:COG2337
Eggnog Description
 ED:Toxic component of a toxin-antitoxin (TA) module

Sequences

Nucleotide sequence (GC-content: 57.6 %):

ATGGAGCGGAAAATCAGTCGGGGCGATGTCTATTACGCCGACTTAAACCCAGTCCTAGGGTCCGAACAGGGCGGGATCCGGCCGGTAGTGGTGGTACAAAATAACGTTGGTAACCGCCACAGCCCAACCGTGATCGTGGTTGCCATTACCGCCCGGATGCAAAAACACCGCCTCCCCACTCACGTTAAGCTCAACCAAGGGGCCGCCGGGCTGGCTCATGATTCCGTAATCTTGTGTGAGCAGATTCGCACGATCGACAAGACCCGGCTCAAACAGCTCGTCACCCGCCTACCCCGAGCGGTGATGGACCAGGTTGACCAGGCGCTCCGGGTAAGCTTAGCCGTTGAGAAATAA

Protein sequence:

MERKISRGDVYYADLNPVLGSEQGGIRPVVVVQNNVGNRHSPTVIVVAITARMQKHRLPTHVKLNQGAAGLAHDSVILCEQIRTIDKTRLKQLVTRLPRAVMDQVDQALRVSLAVEK

GenBank Info

locus_tag - FAM19471-i1-1.1_001522
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003684032.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - type II toxin-antitoxin system PemK/MazF family toxin
protein_id - extdb:FAM19471-i1-1.1_001522

Gene Locus

Located on scaffold FAM19471-i1-1_scf34

FAM19471-i1-1.1_001521
FAM19471-i1-1.1_001523