update range to 10000 bp
locus tag: FAM19471-i1-1.1_001531 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 trxB
Gene Product
 thioredoxin-disulfide reductase
KEGG reaction
 R09372 methaneselenol:NADP+ oxidoreductase; 2 NADPH + 2 H+ + Methylselenic acid <=> 2 NADP+ + 2 H2O + Methaneselenol kornec00450
KEGG reaction
 R03596 hydrogen selenide:NADP+ oxidoreductase; Hydrogen selenide + 3 NADP+ + 3 H2O <=> Selenite + 3 NADPH + 5 H+ kornec00450
KEGG reaction
 R02016 NADPH:oxidized-thioredoxin oxidoreductase; Thioredoxin + NADP+ <=> Thioredoxin disulfide + NADPH + H+
Ortholog
 N0.HOG0001304 thioredoxin-disulfide reductase
KEGG gene
 K00384 trxB, TRR; thioredoxin reductase (NADPH) [EC:1.8.1.9] kornec00450
Eggnog Protein
 EP:trxB
Eggnog Ortholog
 EO:COG0492
Eggnog Description
 ED:Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family
EC Number
 EC:1.8.1.9 thioredoxin-disulfide reductase; NADP-thioredoxin reductase; NADPH-thioredoxin reductase; thioredoxin reductase (NADPH); NADPH2:oxidized thioredoxin oxidoreductase kornec00450

Occurs in the following pathway maps:

Pathway Description
kornec00450 Selenocompound metabolism

Sequences

Nucleotide sequence (GC-content: 55.9 %):

ATGGCAGAAGAGAAGCAAATGAACTATGACGTAGTGGTAATTGGGGCTGGCCCAGGGGGGATGACGGCGGCCATGTACGCTTCCCGAGCGAACCTGTCCGTGTTACTGTTGGACCGCGGAATTTACGGGGGGAACCTTAACAACACTGCCACGATCGAAAATTACACCGGCTTCAAGACCGTTCAGGGGCCGGAATTAGCCCAGAATATGTACGACGGGGCGACCCAGTTTGGGGCGACTTACGGCTACGGGACGGTAACGGCGCTGACCGTCAACGAAGATGGTACCAAGAGCGTGACGACCGACATGGGTGACACCTTCATTGCCAAGGCGGTCGTGATTGCCACCGGGTCCGATCAACGTAAGCTCGGCGCACCGGGTGAACAGGAATACTCCGGCCGCGGGGTTTCCTACTGTGCCGTTTGTGACGGGGCCTTTTTCCGCAACAAGCACCTGATCGTGGTCGGCGGGGGTGACTCCGCCGTTGAAGAGGGGATGTATTTAACTCAGTTTGCCGACAAGGTAACCGTCTTGGTGCGCCACGACCACTTGAAGGCCCAAATGGTAGCCCAGGAACGGGCGAAGAAGAATGGACAAATGGAGTTCATCTTCAACACTGAGGTAACCGAAATTAAGGGTGACGATAACAAGGTGACCGGGGTCAAGACCCACAACAACCAGACTAACGAGGATGGTCACATCGACGCTGATGGGGTCTTCGTGTACGTGGGGGTTGTGCCAATGACCAGTGCCTTTAAGGACCTGGGCATCTTAGACGAACGGGGCTGGGTCAAGACCGACGAGAAGATGGCCACCAGCGTTCCCGGTGTCTACGCGGTTGGTGACGTCCGCAACACCGTCCTTCGCCAAATTGCAACGGCAGTTGGTGACGGGGCGATCGCCGGTCAACAAATCTTCAACTATATTAGCGAAAACGATTAA

Protein sequence:

MAEEKQMNYDVVVIGAGPGGMTAAMYASRANLSVLLLDRGIYGGNLNNTATIENYTGFKTVQGPELAQNMYDGATQFGATYGYGTVTALTVNEDGTKSVTTDMGDTFIAKAVVIATGSDQRKLGAPGEQEYSGRGVSYCAVCDGAFFRNKHLIVVGGGDSAVEEGMYLTQFADKVTVLVRHDHLKAQMVAQERAKKNGQMEFIFNTEVTEIKGDDNKVTGVKTHNNQTNEDGHIDADGVFVYVGVVPMTSAFKDLGILDERGWVKTDEKMATSVPGVYAVGDVRNTVLRQIATAVGDGAIAGQQIFNYISEND

GenBank Info

gene - trxB
locus_tag - FAM19471-i1-1.1_001531
EC_number - 1.8.1.9
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638625.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - thioredoxin-disulfide reductase
protein_id - extdb:FAM19471-i1-1.1_001531

Gene Locus

Located on scaffold FAM19471-i1-1_scf35

FAM19471-i1-1.1_001530
FAM19471-i1-1.1_001532