update range to 10000 bp
locus tag: FAM19471-i1-1.1_001545 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 whiA
Ortholog
 N0.HOG0001300 DNA-binding protein WhiA
KEGG gene
 K09762 whiA; cell division protein WhiA
Gene Ontology
 GO:0065007 biological regulation
Gene Ontology
 GO:0050793 regulation of developmental process
Gene Ontology
 GO:0050789 regulation of biological process
Gene Ontology
 GO:0043937 regulation of sporulation
Gene Ontology
 GO:0008150 biological_process
Eggnog Protein
 EP:whiA
Eggnog Ortholog
 EO:COG1481
Eggnog Description
 ED:May be required for sporulation
Gene Product
 DNA-binding protein WhiA

Sequences

Nucleotide sequence (GC-content: 51.5 %):

ATGTCTTACGCTAGCGAAGTGAAGAAAGAACTCACCGGGATCACGGTACACGAAAAAAACGCCCGGGCCGAATTGATGGCCCTGATCCGGATGAACGGCTCCATTGGGCTGGCTAACCATGCCATGATTTTAAACGTCCAGACCGAAAGTCCGGCCATCGCCCGGCGGATCTATTCACTGATTAAGCAACTTTACAAGGTAGAAAGTGATATTCTGGTCCGCAAGAAAATGAAACTCAAAAAGAATAACACCTACGTGGTTCGCTTACGCCACCACGCCCAGGAAATCTTGGGGGACCTGGCCATTTTGGACGGTTTTCAAATCAAGGAACGGGTTCCCTTGGACTTGTTGACCGACGACTTGATGATCAGGTCATACTTGCGGGGGGCCTTCTTGGCGGGCGGTTCCGTTAATAACCCGGAGACGTCGCGCTACCACCTCGAGATCTATTCTTTGTATGAAGAGCACAACGATATGATCGCTGAAATGATCAACCGCTATGACCTAAACGCCCGCACCACCAACCGGCGCAGTGGCTACATTGTCTACTTAAAGGAAGCCGAAAAGATCGCGAACTTCTTGCAGTTGATCGGGGCAACCACTTCAATGCTCGAATTTGAAAACATCCGGATTGTCCGCGACATGCGTAATTCGGTCAACCGGCTGGTTAATTGTGAGAACGCCAATATGGATAAGGTGGCCAATGCCGCCAATCGCCAGGTGGAAAATATTATGCTGATTGAGGCGACGGTGGGGCTAAGTAGCCTCCCTGAAAAGCTACGTGCCATCGCCGAAACTAGGTTGGCTCACCAGGAAGTAAGTCTAAAGGAACTGGGGACGTTGGTACCCGGGGGCCCGATTTCAAAGTCGGGGGTCAATCACCGGCTCCGCAAGCTAAATGCCTACGCCGACGAATTGCGGCAGGGCAAGGCAATCTAA

Protein sequence:

MSYASEVKKELTGITVHEKNARAELMALIRMNGSIGLANHAMILNVQTESPAIARRIYSLIKQLYKVESDILVRKKMKLKKNNTYVVRLRHHAQEILGDLAILDGFQIKERVPLDLLTDDLMIRSYLRGAFLAGGSVNNPETSRYHLEIYSLYEEHNDMIAEMINRYDLNARTTNRRSGYIVYLKEAEKIANFLQLIGATTSMLEFENIRIVRDMRNSVNRLVNCENANMDKVANAANRQVENIMLIEATVGLSSLPEKLRAIAETRLAHQEVSLKELGTLVPGGPISKSGVNHRLRKLNAYADELRQGKAI

GenBank Info

gene - whiA
locus_tag - FAM19471-i1-1.1_001545
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003714062.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - DNA-binding protein WhiA
protein_id - extdb:FAM19471-i1-1.1_001545

Gene Locus

Located on scaffold FAM19471-i1-1_scf35

FAM19471-i1-1.1_001544
FAM19471-i1-1.1_001546