update range to 10000 bp
locus tag: FAM13496-i1-1.1_001329 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 polysaccharide biosynthesis protein
Ortholog
 N0.HOG0003301 polysaccharide biosynthesis protein
KEGG gene
 K03328 TC.PST; polysaccharide transporter, PST family
Gene Ontology
 GO:0071944 cell periphery
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0016020 membrane
Gene Ontology
 GO:0005886 plasma membrane
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:ytgP
Eggnog Ortholog
 EO:COG2244
Eggnog Description
 ED:Membrane protein involved in the export of O-antigen and teichoic acid

Sequences

Nucleotide sequence (GC-content: 41.1 %):

ATGACTGAAACTAAAACTGACACGCAGCAGCAGCAAATGCTAAGAGGGACGGCATGGATGACAGCATCCAATATTATCAGTCGTCTCTTAGGGGCACTCTATATTATTCCTTGGTATGCTTGGATGGGCAAACAGGGTGACCAAGCCAATGCTCTCTTTGGTCAGGGATATAATATTTATGCCCTTTTCCTTTTGATTTCGACAGCAGGGATTCCAGTCGCCATTGCCAAGCAGGTATCAAAATATAACACACTTGGAAAGATGGAAACGAGTTTCTTCTTACTCAAACGTATCTTGTATTATATGATTGGGCTTGGACTAATTTTTGGTGTTTTCATGTATTTTGCTTCTCCGTGGATGTCATATCTTTCTGGGGGAGACGAAGACCTGGTTCGAGTAATGCGCAGCCTTTCTTGGGCGGTTGTCATTTTTCCATCGATGTCTGTTTTACGAGGCTTTTTCCAGGGCTTTAACAACATGAAGCCTTATGCCCTAAGTCAGATTGCGGAGCAGATTATCCGTGTCATTTGGATGCTGTTGGCGACTTTCTTCATCATGAAAATTGGTACAGGTGACTATGTGACTGCAGTTGTCCAATCGACTTTTGCTGCTTTCATCGGTATGTTGGCTAGTTATGGGGTACTTTTCTTCTATCTTTGGAAAGAAGGCAAGCTCAAGAGCCTTTTTGGTAAGCAGGCCGTTCATCCTGATATCAATCCAACTGCAATTGTTATTGAGACATTTAAGGAAGCCATTCCCTTCATTATTACTGGATCAGCGGTTCAACTTTTCCAGTTGATTGATCAATGGACTTTTATCCGTACTATGGAGAGGTTTACAAGCTATAGTAATAGTCAGCTTCAGGTTCTCTATGCTTATTTGTCTTCAAACCCAAGTAAGATTACTATGATTTTGATTGCCGTTGCTATTTCTATTGCTGGGGTCGGCATCCCACTTCTGACAGAAAATATGGTTAAAAAGGACCTTGGGGGAGCAGCCAAACTCATTATTAATAATCTCCAGTTACTTTTGCTCTTTATTATACCAGCCATTGCGGGTTCTGTGATTTTGGCCAAGCCATTATACACTGTCTTTTATGGAGCACCAGACAGTCAGGCTCTTTTACTCTTCGTAGCTAGTTTGATTCAAGTGATTTTCTTAGCTTTGTATAGTGTTTTAGCACCAATGCTTCAGGCTATCTTTGAGACCCGTAAAGCTATCAATTATTTTGCGATTGGGGTGCTGATTAAGGCCATTCTACAGCTACCGTTGATTATTTTTTTAGGAGCCCTCGGTCCGGTTATTTCAACAGCCATTGGGTTAGGAGTTCCTATTGCTTTGATGTATAATCGCCTTCACACAGTTACTCACTTTAGTCGTAAGATAGTCTTTAGAAAAGCTCTACTCATTTGTATTATTACAATGCTCATGGTTATTCCAGTTGCTGTTTTCTATTGGTTATTCCAATTTGTCCTATCTCCAACAAGTCGTATGGGTAGTGTGATTTACTTAGTGATTGGAGGAGGTCTTGGCGTTTTGGTCTATGGAGTGCTTGCTCTTGTGACACATATGGCTGATCAATTGCTTGGCGCACGAGCAGGTAGATTACGAGCTAAATTACATATTAAATAG

Protein sequence:

MTETKTDTQQQQMLRGTAWMTASNIISRLLGALYIIPWYAWMGKQGDQANALFGQGYNIYALFLLISTAGIPVAIAKQVSKYNTLGKMETSFFLLKRILYYMIGLGLIFGVFMYFASPWMSYLSGGDEDLVRVMRSLSWAVVIFPSMSVLRGFFQGFNNMKPYALSQIAEQIIRVIWMLLATFFIMKIGTGDYVTAVVQSTFAAFIGMLASYGVLFFYLWKEGKLKSLFGKQAVHPDINPTAIVIETFKEAIPFIITGSAVQLFQLIDQWTFIRTMERFTSYSNSQLQVLYAYLSSNPSKITMILIAVAISIAGVGIPLLTENMVKKDLGGAAKLIINNLQLLLLFIIPAIAGSVILAKPLYTVFYGAPDSQALLLFVASLIQVIFLALYSVLAPMLQAIFETRKAINYFAIGVLIKAILQLPLIIFLGALGPVISTAIGLGVPIALMYNRLHTVTHFSRKIVFRKALLICIITMLMVIPVAVFYWLFQFVLSPTSRMGSVIYLVIGGGLGVLVYGVLALVTHMADQLLGARAGRLRAKLHIK

GenBank Info

locus_tag - FAM13496-i1-1.1_001329
inference - COORDINATES: similar to AA sequence:RefSeq:WP_011226883.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - polysaccharide biosynthesis protein
protein_id - extdb:FAM13496-i1-1.1_001329

Gene Locus

Located on scaffold FAM13496-i1-1_scf18

Cellular location expand

Responsible annotations:
SL-0039: GO:0005886 plasma membrane
SL-0162: GO:0016020 membrane
FAM13496-i1-1.1_001328
FAM13496-i1-1.1_001330