OpenGenomeBrowser
Tools
TAXID 1308
ORGANISM FAM13496
GENOME FAM13496-i1-1.1
GENE FAM13496-i1-1.1_001350
locus tag:
FAM13496-i1-1.1_001350
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
Type
Name
Description
Pathways
Gene Product
PBP1A family penicillin-binding protein
Ortholog
N0.HOG0000990 penicillin-binding protein
KEGG gene
K05366 mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4]
kornec00550 kornec01100 kornec01501
Gene Ontology
GO:0005576 extracellular region
Gene Ontology
GO:0005575 cellular_component
Eggnog Protein
EP:ponA
Eggnog Ortholog
EO:COG0744
Eggnog Description
ED:penicillin-binding protein
EC Number
EC:3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase; DD-peptidase; D-alanyl-D-alanine-carboxypeptidase; D-alanyl-D-alanine-cleaving-peptidase; D-alanyl-D-alanine-cleaving peptidase; DD-transpeptidase; D-alanine carboxypeptidase; DD-carboxypeptidase; D-alanyl carboxypeptidase
kornec00550
EC Number
EC:2.4.1.129 peptidoglycan glycosyltransferase; PG-II; bactoprenyldiphospho-N-acetylmuramoyl-(N-acetyl-D-glucosaminyl)-pentapeptide:peptidoglycan N-acetylmuramoyl-N-acetyl-D-glucosaminyltransferase; penicillin binding protein (3 or 1B); peptidoglycan transglycosylase; undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide):undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide) disaccharidetransferase
kornec00550
Occurs in the following pathway maps:
Pathway
Description
kornec00550
Peptidoglycan biosynthesis
kornec01100
Metabolic pathways
kornec01501
beta-Lactam resistance
Sequences
Nucleotide sequence (GC-content: 39.5 %):
A T G G C T A A A T T T A A T T T C A G C A A C T T T A A A G A A T C A C T T A A C G G T T C A A C T A A A C G T G C T A A A A A C A C A C A G G T T A A A C G T T C A G A T T C T T C T C G C T A T A G C A A A G G A A A A C G C T C A G C T G C T T C A G A T C A A A A T T T A G G A T G G C G T A T T G C A A A A T A C G C T T T T A T T G G A C T A C T C A C T T T C T T T G T A A T C T G T G T C A T C G C T G G T G G T G G A C T C T T T G C T T A C T A T G T T A G C A G T G T T C C T A A A C T T A C C G A G A A C A A G T T G C A A T C A A C A A A C T C A A G T A G G A T T T A C G A T G G T A A T G G T G G T C T T A T T G C T G A C T T G G G A T C C G A A A A A C G T G A A A G T G C A T C A A C A G A T G A G A T T C C T A T A A T C C T A G T C A A T G C A A T T A C C T C T A T A G A G G A T A A G C G T T T C T T T A C C C A T C G C G G C A T T G A C G T T T A T C G T A T T A T G G G A G C C G C T A T T A A C A A C C T T C G C C A T A A C A G C A C T C A A G G G G G A T C T A C A C T T G A T C A A C A G T T G A T T A A G T T A G C C T A C T T C T C A A C T A A T A C C T C A G A C C A A A C C C T T A A A C G T A A G T C A C A A G A A A T A T G G T T A T C T C T C C A A A T G G A G C G T C A G T A T A C T A A A C A A G A A A T C T T G A C C T T C T A C G T T A A T A A G G T T T A T A T G G G T A A T G G T T A C T A C G G T A T G A A G A C C G C A G C T A A A T C T T A T T T T G G T A A A G A A T T A G G T G A C C T C T C A G T T G C C C A A G C A G C T C T T C T T G C T G G T A T C C C A C A A G C A C C A A C A C A A T A T A A T C C T T A T G C T A A T C C G G A T G C T G C T A A A G A A C G T C G C A A C A C T G T T C T T A A T G A A A T G T A T G A A G A C A A A A A T A T T T C T A A A G A G G A G T A C G A G C A A G C T A A A G C A A C G G A T G T A T C A G A T G G T C T T C T T C C A C T T A C G A A T A A A G C T A G C T A C G A A C C A T A C C T A G A T A A C T A C A T C A A A C A A G T T A T T G A A C A A G T C T C T A C C G A A G C C A A T G C T G A T A T C T A C T C A G C T G G G C T C G A T G T C T A T A C A A A T C T T G A T C C T G A T A T T C A A A A A T A C A T T T G G A A T G T C T A C A A C T C A A A T G A T T A T A T T G C T T A T C C T G A T G A C A A A T T T C A A G T A G C T T C T A C T A T C A T T G A T G T T A C C A A T G G A C A T G T T G T T G C T C A A T T G G G A T C A C G T C A C C A A G A C G A A A A T A T T G C C C T T G G T A C A A A C C A A G C T G T T C A A A C T G A C C G T G A C T G G G G A T C T A C A A T G A A A C C T A T C A C C G A T T A C G C A C C T G C T A T T G A A A A A A G A G T A T A T A C T A A C A C C G G T A C T A C C G T T T A C G A T A C C C C T T A T A A T T T C C C A G G T A C T T C A A C T C C A G T T T A C A A C T G G G A C C G C A A G T A T T A C G G A A G T A T C T C T C T G A C T T A T G C G A T T C A A A A A T C A C G T A A C G T T C C T G C G G T T A A A G C G C T T C A A G C G A C T G G C T T G G A G T A T G C T C A A T C C T T T T T G A A A G A T T T A G G T A T T G A G T A C C C A G A G A T G T T C T A T T C A A A C G C T A T C T C A T C T T C A A C A A C A T C A T C A G A T C C T A A A T A T G G T G C T T C A A G T G A G A A G A T G G C G G C T G C C T A T G C A G C C T T T G C C A A T G G T G G T A C T T A C T A T A A A C C A T C C T A C A T T A A A T C A A T T A A A T T T G A A G A T G G T T C A A C A A A A T C A T A C G A T T C T A A A G G T G T C G A G G C C A T G T C G C C A C A A A C A G C T T A T A T G A T G A A T A G C A T G T T G A A A C A G G T T T T G A C A G G T G G T A C A G C G A C T G A A G C T T A T G T A C C T G G C A C C A T C A A T G C T G G T A A A A C G G G T A C A T C T A G C T A C A G T G A C G A T G A G T A C T A T C A A G T A C A A A A A G A A A G T G G C G T C T A C G C T G A T C T T A T T G T T C C T G A C G A A A C G T T C G T T G G T T A T A A T A C T A A A T A T G C A A T G G C C A T T T G G A C A G G T T A T G A A A A C C G T A A A A C T C C A C T T T A T G G C T C A G A C C T A A A T A T C G C T A A A C A A A T C T A C G G T C T A A C A A G T A G A T A C C T C A A C C A G A T G T A T G G T G C A G G T T C G A A A G A T T T C G A T A T G C C T A G T G G T G T T T A C A A C A A T G G T A G T T A C G T C T T C C T A A C T G G T T C G T C A A C G T C A A A T G T T T A T A A C G G A T C A C T A G G A A C A T C T A G C T C A T C A T C A A G T T C G G A T T A T G G T A A A A G T A G T G A C T C A T C A A G T T C A C A A G A T A G T C A A C A G T A T G G C C C A G A T G C A T C A A C A A A T C C T T C A A C A T C G G G T T C T A A C G G T G C T G A G A A T T C A A A T T T A A A C A C T T C T A C T T C T A C T T C T A C T T C T A C A G T A G A T G A G T A A
Protein sequence:
M A K F N F S N F K E S L N G S T K R A K N T Q V K R S D S S R Y S K G K R S A A S D Q N L G W R I A K Y A F I G L L T F F V I C V I A G G G L F A Y Y V S S V P K L T E N K L Q S T N S S R I Y D G N G G L I A D L G S E K R E S A S T D E I P I I L V N A I T S I E D K R F F T H R G I D V Y R I M G A A I N N L R H N S T Q G G S T L D Q Q L I K L A Y F S T N T S D Q T L K R K S Q E I W L S L Q M E R Q Y T K Q E I L T F Y V N K V Y M G N G Y Y G M K T A A K S Y F G K E L G D L S V A Q A A L L A G I P Q A P T Q Y N P Y A N P D A A K E R R N T V L N E M Y E D K N I S K E E Y E Q A K A T D V S D G L L P L T N K A S Y E P Y L D N Y I K Q V I E Q V S T E A N A D I Y S A G L D V Y T N L D P D I Q K Y I W N V Y N S N D Y I A Y P D D K F Q V A S T I I D V T N G H V V A Q L G S R H Q D E N I A L G T N Q A V Q T D R D W G S T M K P I T D Y A P A I E K R V Y T N T G T T V Y D T P Y N F P G T S T P V Y N W D R K Y Y G S I S L T Y A I Q K S R N V P A V K A L Q A T G L E Y A Q S F L K D L G I E Y P E M F Y S N A I S S S T T S S D P K Y G A S S E K M A A A Y A A F A N G G T Y Y K P S Y I K S I K F E D G S T K S Y D S K G V E A M S P Q T A Y M M N S M L K Q V L T G G T A T E A Y V P G T I N A G K T G T S S Y S D D E Y Y Q V Q K E S G V Y A D L I V P D E T F V G Y N T K Y A M A I W T G Y E N R K T P L Y G S D L N I A K Q I Y G L T S R Y L N Q M Y G A G S K D F D M P S G V Y N N G S Y V F L T G S S T S N V Y N G S L G T S S S S S S S D Y G K S S D S S S S Q D S Q Q Y G P D A S T N P S T S G S N G A E N S N L N T S T S T S T S T V D E
GenBank Info
locus_tag - FAM13496-i1-1.1_001350
Gene Locus
Located on scaffold FAM13496-i1-1_scf19
Cellular location
Responsible annotations:
SL-0243 :
GO:0005576
extracellular region
FAM13496-i1-1.1_001349
