update range to 10000 bp
locus tag: FAM13496-i1-1.1_001382 genome: FAM13496-i1-1.1
species: Streptococcus thermophilus taxid: 1308

Annotations

Type Name Description Pathways
Gene Product
 rRNA pseudouridine synthase
Ortholog
 N0.HOG0000745 rRNA pseudouridine synthase
KEGG gene
 K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Eggnog Protein
 EP:rluB
Eggnog Ortholog
 EO:COG1187
Eggnog Description
 ED:Belongs to the pseudouridine synthase RsuA family
EC Number
 EC:5.4.99.22 23S rRNA pseudouridine2605 synthase; RluB; YciL

Sequences

Nucleotide sequence (GC-content: 39.9 %):

ATGCGAATTAATAAATATATCGCCCACGCTGGTGTGGCTAGTCGTCGTAAAGCTGAGGAATTGATTAAAGAAGGCCGTGTGACTTTAAACGGTAAGACCGTTATGGAATTGGCAACAATTGTCAAAAATGGCGACATTGTCGAGGTAAATGGAAGCCCAATTTATAATGAAGAAAAGGTATACTACCTTCTTAATAAACCACGTGGGGTTATTTCTTCAGTATCTGATGAGAAAAACCGTAAGACGGTTATTGATCTAATGCCCCATGTTAAGGAACGTATCTATCCTGTTGGTCGTCTTGATTGGGATACGACTGGCCTTCTTATTTTAACAAATGATGGTGACTTTACCGATAAAATGATTCACCCACGTAATGAGATTGATAAGGTTTATTTGGCGCGTGTTAAAGGTATTGCGACTAAGGAAAATCTTCGTCCTTTGACTCGTGGTGTGGTGATTGATGGTAAAAAAACTCAGCCGGCCCATTACAATATTATCAAGGTGGATCATGAAAAGAACCGATCAGTCGTCGAGTTGACGATTCATGAAGGGCGAAACCATCAGGTTAAGAAAATGTTTGAATCAGTAGGTTTGATTGTTGATAAGTTGTCACGTACCCGTTTTGGTACCCTAGATTTGACAGGACTACGTCCAGGAGAGTCACGCCGTCTAAGCAAAAAAGAAATTAGTCAGCTTCATAACATTGCTGTTAACAAGGTTAAATGA

Protein sequence:

MRINKYIAHAGVASRRKAEELIKEGRVTLNGKTVMELATIVKNGDIVEVNGSPIYNEEKVYYLLNKPRGVISSVSDEKNRKTVIDLMPHVKERIYPVGRLDWDTTGLLILTNDGDFTDKMIHPRNEIDKVYLARVKGIATKENLRPLTRGVVIDGKKTQPAHYNIIKVDHEKNRSVVELTIHEGRNHQVKKMFESVGLIVDKLSRTRFGTLDLTGLRPGESRRLSKKEISQLHNIAVNKVK

GenBank Info

locus_tag - FAM13496-i1-1.1_001382
inference - COORDINATES: similar to AA sequence:RefSeq:WP_002883686.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - rRNA pseudouridine synthase
protein_id - extdb:FAM13496-i1-1.1_001382

Gene Locus

Located on scaffold FAM13496-i1-1_scf19

FAM13496-i1-1.1_001381
FAM13496-i1-1.1_001383