locus tag:
FAM13496-i1-1.1_001583
genome:
FAM13496-i1-1.1
species:
Streptococcus thermophilus
taxid:
1308
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Code
|
smc |
|
|
|
Ortholog
|
N0.HOG0001455 |
chromosome segregation protein SMC |
|
|
KEGG gene
|
K03529 |
smc; chromosome segregation protein |
|
|
Eggnog Protein
|
EP:smc |
|
|
|
Eggnog Ortholog
|
EO:COG1196 |
|
|
|
Eggnog Description
|
ED:Required for chromosome condensation and partitioning |
|
|
|
Gene Product
|
chromosome segregation protein SMC |
|
|
Sequences
Nucleotide sequence (GC-content: 42.8 %):
ATGTACTTGAAATCAATTGAAATGCAGGGCTTTAAGTCCTTTGCGGATAAGACGAAGGTCGTATTTGACAAAGGAGTAACAGCGGTTGTAGGTCCAAATGGATCGGGAAAATCAAATATTACAGAGAGTCTGCGTTGGGCACTGGGCGAATCCTCTGCAAAGAGTTTGCGTGGGGGTAAGATGCCAGATGTTATTTTCGCAGGTACAGAGGTCCGTAAAGCTCTTAACTACGCGGAAGTAGCGGTCACTCTTGATAACAGTGACGGCTTTATCGCAGGTGTTGGTGAAACCATTCGTGTGGAACGTCATATTTATCGAAATGGTGACAATGACTACTTGATCAATGGTAGGAAGGTTCGTCTGCGTGATATTCGTGACCTCTTCATGGATACTGGTCTTGGGCGTGATTCTTTTTCTATTATTTCTCAAGGTCGTGTTGAGGCTATTTTTAATGCCAAACCTGAGGATCGCCGTGCTATTTTCGAGGAAGCTGCAGGTATTCTTAAATATAAGATACGTAAGAAAGAAACCGAAAGCAAGCTTAATCAAACTCAGGATAATCTTGATCGATTGGAAGATATCATCTATGAGCTAGATGGTCAGGTTAAACCACTTGAAAAGCAAGCAGCGACAGCAAAATGCTACTTAGAACTCGATGGAGAGCGTAGACAGACCCTGCTTAACCTTTTAGTGCATGACATTGAAGTTGGAAAATCTGACTTAACCCAAACACAAGAAGATTTGGCAGAGGTCAAGGACAAATTAACCAGCTATTATGAGGAACGTCATCGTTTAGAGACGGAGAACCAAGAACTCAAGCAAAAACGTCACCAAATTTCAGAACAAATTTCTTCTGACCAACAAACCTTAGTAGATGTCACACGACTTATTAGTGACTTTGAGCGTCAAATTGATCTCTATACCATGGAGAGTCAGCAGCGTTCCGAGAGAAAAGAAGAGACAGCAGCTCGTCTCAGCGAGCTAGAGAGTTTGAAAGCAGAAGCACAGGCTTCGCTTGATAAGGTTAACCAACGTCAAGTTAAATTGAATGCTGAATTGAATACTATTGCTCAGGAGCTGACTGCCATTCAAAAAGATCTGGAGCAATTTTCTGATGACCCAGATACGCTTATTGAACATTTGCGAGAAGACTATGTCAGTCTTATGCAGGAGGAAGCTAAGGTTTCCAACAGTCTAACTCAGGTCACTCACGACATGGAAAGTCAGACACAAGCACTTGAGGCACAGGCTGAAGAATATAAACAGGCTCAAGCTGATTTGCTCTCTGCTCAGGAAGTAGCTAGCGAAGCTCAAAAGGCTTATCAAGCAGCTCAAGCGAGTCTTCAAAATCTCTTGGATAGCTACAAAGAGAAGGATCAGTCTTATCAAGTCATCGATAAGGACTATCAAGAAGCTCAAACGAAGATGTTTGACCTCATGGATCACCTTAAGAGTAAAGAAGCTCGCCGTCAAAGTCTAGAGTCTATTCAAAAAAATCATAGTAATTTCTATGCAGGGGTTAAGTCCGTTCTTCAAAATGCCCAATCCATTCAGGGAATTATTGGCGCTGTTAGTGAACACTTGACCTTTGATACGCGCTATCAGACGGCTCTTGAAATTGCAATGGGAACTAGTGGGCAAAACATCATTGTTGAGGATGAAGCAGCAGCTAAGCGTTCGATTGATTACTTGAAACGTAATCGTCAGGGTCGTGCGACTTTCTTACCATTGACAACCATCAAACCACGTCAACTGAATGGGCAATTTGCTCAAATTCTTGCCAATGCACCTGGTTTCATTGGTATGGCTTCCGATTTGGTCACTTACGAGGAACGTTTGGCTAATATTTTTCAAAACATCTTAGGTGTAACGGCAATCTTTAATACCATCGACAATGCCAATAAGGCTGCTCGAGCTGTTCGTTTTCAAGTACGTATGGTTACTCTTGATGGCTCTGAAATCCGCCCTGGTGGAGCCTTTGCCGGTGGTGCCAATAAGCAAAATAATAGTCTCTTTATTAAGCCCGAACTAGATGCATTAACTACTGAAATTAGCCAAATTAAGGCTCAATTAAGTGATAGTGAGGCTAAGGTTGAAGCCCTTAAGACAAAGCGTAAGGCTTTACAGAAAGCGCTAGAAGATCTCAAAGTTGATGGTGAAAATGCTCGTCTGCAGGAGCAAAGGCTAGGCTTGGAGTATCAGCAAGCCTTATCAGATGTAGAGAAAAATCAAGTCTTGGTAGATAGTTTCAAGCAGGGTTCTCAGGGATCTGAAGGGGCAAATCTTCAAACTAAGTCTGAGCAACTTAAGGCAGAGTTAGCGCAAATTGCATCTAAGCGTGAGGCCATCAATGACCGTATCGAAGCAATTAAGGAAGATAAGGATGCCCTTGGCCAACAAAAACAAGCTCTCTTAGACAGGCAATCTGAACTCCAGTTGAAGGAGCGCGACTTGCAAGCGGAATTGCGTTTTGCTAAGACAGAAAGTAATCGTCTTCAAGCAGACTTGTCTGAATTAACGAAGGAATCTGACAGTCTCAAGGCTCTCCTCAATAACCAAGTCGATGAGGATCAAACTGATCGTCTGCCGCAGTTACAAGCACAGCATAAAGAAGCTGTTCAACGTAAAGACGATTTGGAACAAGAACTTGTTCGTGCCAAGATTCAAGTGCAAGACTACGAAGGTCAGTTGGAGGACTTGGAGGAGCGTTTGGCTAAAGCGGGGAACCGCAATGAAGATTTGATTCGTCAACAGACTCGATTGGAAGAGCGTGAAAGTCAAATTAGTCAGTCGCTTCGTAAGTTTGCGACTCAGTTGGCTGAAGATTACCAGATGACGCTTGAAGCAGCCAAAGGTCAGGTTACCCCTCTTGAGAATGTTGAGCAAACTCGCCAGAATCTTCAAAGTCTTGAGCGTTCGATTAAGGCTTTGGGCCCTGTCAATGTAGAGGCTATTGCTCAATTTGAAGAAGTTAAGCAACGTCTCGATTTCTTGAATGGTCAAAAGGATGATTTACTTGAAGCTAAGGGTCTCCTTCTGAATACCATCAATGATTTGGATGGTGAGGTGAAATCTCGCTTTAAAGCAACCTTCGAGACTATCCGTGAAAGCTTTAAACAGACCTTTACCCAGATGTTTGGTGGTGGATCAGCAGATTTGATTTTGACCTCAGATAATCTCCTAGAGGCCGGTGTAGAAATTTCTGTTCAGCCACCAGGTAAGAAAATTCAATCACTTAACCTTATGTCAGGTGGTGAGAAGGCCTTGTCAGCTTTGGCTCTTCTCTTTGCCATCATTCGTGTTAAGACTATACCTTTTGTTATCCTAGACGAAGTAGAAGCGGCTTTGGATGAAGCCAATGTTAAACGCTTCGGTGACTACCTCAATCATTTTGACAAGTCTAGTCAATTTATCGTAGTTACCCACCGTAAGGGAACCATGTCAGCAGCAGACTCTATTTATGGGGTGACAATGCAGGAATCTGGTGTCTCAAAAATTGTTTCAGTTAAACTAAAAGACCTCGATTTTGACTAA
Protein sequence:
MYLKSIEMQGFKSFADKTKVVFDKGVTAVVGPNGSGKSNITESLRWALGESSAKSLRGGKMPDVIFAGTEVRKALNYAEVAVTLDNSDGFIAGVGETIRVERHIYRNGDNDYLINGRKVRLRDIRDLFMDTGLGRDSFSIISQGRVEAIFNAKPEDRRAIFEEAAGILKYKIRKKETESKLNQTQDNLDRLEDIIYELDGQVKPLEKQAATAKCYLELDGERRQTLLNLLVHDIEVGKSDLTQTQEDLAEVKDKLTSYYEERHRLETENQELKQKRHQISEQISSDQQTLVDVTRLISDFERQIDLYTMESQQRSERKEETAARLSELESLKAEAQASLDKVNQRQVKLNAELNTIAQELTAIQKDLEQFSDDPDTLIEHLREDYVSLMQEEAKVSNSLTQVTHDMESQTQALEAQAEEYKQAQADLLSAQEVASEAQKAYQAAQASLQNLLDSYKEKDQSYQVIDKDYQEAQTKMFDLMDHLKSKEARRQSLESIQKNHSNFYAGVKSVLQNAQSIQGIIGAVSEHLTFDTRYQTALEIAMGTSGQNIIVEDEAAAKRSIDYLKRNRQGRATFLPLTTIKPRQLNGQFAQILANAPGFIGMASDLVTYEERLANIFQNILGVTAIFNTIDNANKAARAVRFQVRMVTLDGSEIRPGGAFAGGANKQNNSLFIKPELDALTTEISQIKAQLSDSEAKVEALKTKRKALQKALEDLKVDGENARLQEQRLGLEYQQALSDVEKNQVLVDSFKQGSQGSEGANLQTKSEQLKAELAQIASKREAINDRIEAIKEDKDALGQQKQALLDRQSELQLKERDLQAELRFAKTESNRLQADLSELTKESDSLKALLNNQVDEDQTDRLPQLQAQHKEAVQRKDDLEQELVRAKIQVQDYEGQLEDLEERLAKAGNRNEDLIRQQTRLEERESQISQSLRKFATQLAEDYQMTLEAAKGQVTPLENVEQTRQNLQSLERSIKALGPVNVEAIAQFEEVKQRLDFLNGQKDDLLEAKGLLLNTINDLDGEVKSRFKATFETIRESFKQTFTQMFGGGSADLILTSDNLLEAGVEISVQPPGKKIQSLNLMSGGEKALSALALLFAIIRVKTIPFVILDEVEAALDEANVKRFGDYLNHFDKSSQFIVVTHRKGTMSAADSIYGVTMQESGVSKIVSVKLKDLDFD
GenBank Info
gene - smc
locus_tag - FAM13496-i1-1.1_001583
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003096852.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - chromosome segregation protein SMC
protein_id - extdb:FAM13496-i1-1.1_001583
Gene Locus
Located on scaffold FAM13496-i1-1_scf24
FAM13496-i1-1.1_001582
