Annotations

Type Name Description Pathways
Gene Product
ribonuclease III
Ortholog
N0.HOG0001243 ribonuclease III
KEGG gene
K03685 rnc, DROSHA, RNT1; ribonuclease III [EC:3.1.26.3] kornec03008kornec05205
Gene Ontology
GO:1901363 heterocyclic compound binding
Gene Ontology
GO:1901360 organic cyclic compound metabolic process
Gene Ontology
GO:0140098 catalytic activity, acting on RNA
Gene Ontology
GO:0097159 organic cyclic compound binding
Gene Ontology
GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic
Gene Ontology
GO:0090501 RNA phosphodiester bond hydrolysis
Gene Ontology
GO:0090305 nucleic acid phosphodiester bond hydrolysis
Gene Ontology
GO:0090304 nucleic acid metabolic process
Gene Ontology
GO:0071704 organic substance metabolic process
Gene Ontology
GO:0046483 heterocycle metabolic process
Gene Ontology
GO:0044238 primary metabolic process
Gene Ontology
GO:0044237 cellular metabolic process
Gene Ontology
GO:0043170 macromolecule metabolic process
Gene Ontology
GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
GO:0032296 double-stranded RNA-specific ribonuclease activity
Gene Ontology
GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
Gene Ontology
GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters
Gene Ontology
GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
GO:0016787 hydrolase activity
Gene Ontology
GO:0016070 RNA metabolic process
Gene Ontology
GO:0010467 gene expression
Gene Ontology
GO:0009987 cellular process
Gene Ontology
GO:0008152 metabolic process
Gene Ontology
GO:0008150 biological_process
Gene Ontology
GO:0006807 nitrogen compound metabolic process
Gene Ontology
GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
GO:0006396 RNA processing
Gene Ontology
GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
GO:0005488 binding
Gene Ontology
GO:0004540 ribonuclease activity
Gene Ontology
GO:0004525 ribonuclease III activity
Gene Ontology
GO:0004521 endoribonuclease activity
Gene Ontology
GO:0004519 endonuclease activity
Gene Ontology
GO:0004518 nuclease activity
Gene Ontology
GO:0003824 catalytic activity
Gene Ontology
GO:0003725 double-stranded RNA binding
Gene Ontology
GO:0003723 RNA binding
Gene Ontology
GO:0003676 nucleic acid binding
Gene Ontology
GO:0003674 molecular_function
Eggnog Protein
EP:rnc
Eggnog Ortholog
EO:COG0571
Eggnog Description
ED:Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs
EC Number
EC:3.1.26.3 ribonuclease III; RNase III; ribonuclease 3

Occurs in the following pathway maps:

Pathway Description
kornec03008 Ribosome biogenesis in eukaryotes
kornec05205 Proteoglycans in cancer

Sequences

Nucleotide sequence (GC-content: 42.6 %):

ATGAATCAACTTGAACAAAAACTTGAACAGGACTTTGGTATTGTTTTTAGCCAAAAGGACCTTTTAGAAACTGCATTTACACATACCTCATATGCCAATGAGCACCGCCTCCTAAACATTTCACATAATGAACGTTTGGAATTTTTAGGAGACGCGGCTCTGCAATTAGTCATTTCTGTTTACCTTTACAATCGTTACCCTAACAAACCGGAGGGGGAAATGTCTAAGATGCGTAGTACTATCGTTCGTGAAGAGAGCTTAGCCGGATTTACAAAGGCTTGCGGATTCGAGCAGTATATTCGTCTTGGTAAAGGTGAAGAAAAATCTGGTGGTCGTGAGCGTGCCACCATTCTCGGTGATCTCTGGGAAGCCTTCCTTGGAGCTCTCTATCTGGATCAAGGTTTGCCTGCTGTTGAGAAATTTTTGAATCAGGTCATGATTCCTCAGGTTGAAAAGGGGAACTTTGACCGAGTAATAGACTATAAGACGGCGCTTCAAGAGCGTCTCCAGGTCAATGGTAAGGTTGATATTACTTATACTGTTATCGATGAGTCTGGACCTGCTCATGCTAAGGAATTTACTATGCAGGTAGCTGTTGATGGTAAGGAACTCAGCACTGGTTTCGGAAAATCAAAGAAATTAGCTGAACAGGCAGCAGCGAAGTCTGCCCTTGAACAACTAGGTAATTAA

Protein sequence:

MNQLEQKLEQDFGIVFSQKDLLETAFTHTSYANEHRLLNISHNERLEFLGDAALQLVISVYLYNRYPNKPEGEMSKMRSTIVREESLAGFTKACGFEQYIRLGKGEEKSGGRERATILGDLWEAFLGALYLDQGLPAVEKFLNQVMIPQVEKGNFDRVIDYKTALQERLQVNGKVDITYTVIDESGPAHAKEFTMQVAVDGKELSTGFGKSKKLAEQAAAKSALEQLGN

GenBank Info

locus_tag - FAM13496-i1-1.1_001584
EC_number - 3.1.26.3
inference - COORDINATES: similar to AA sequence:RefSeq:WP_004182345.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ribonuclease III
protein_id - extdb:FAM13496-i1-1.1_001584

Gene Locus

Located on scaffold FAM13496-i1-1_scf24


FAM13496-i1-1.1_001583
FAM13496-i1-1.1_001585