update range to 10000 bp
locus tag: FAM19038-p1-1.1_002496 genome: FAM19038-p1-1.1
species: Acidipropionibacterium jensenii taxid: 1749

Annotations

Type Name Description Pathways
KEGG reaction
 R07456 D-ribulose 5-phosphate,D-glyceraldehyde 3-phosphate pyridoxal 5'-phosphate-lyase; D-Glyceraldehyde 3-phosphate + D-Ribulose 5-phosphate + L-Glutamine <=> Pyridoxal phosphate + L-Glutamate + Orthophosphate + 3 H2O
Gene Product
 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
Gene Code
 pdxT
Ortholog
 N0.HOG0001959 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
KEGG gene
 K08681 pdxT, pdx2; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] kornec00750kornec01100kornec01240
Gene Ontology
 GO:1903600 glutaminase complex
Gene Ontology
 GO:1902494 catalytic complex
Gene Ontology
 GO:1901617 organic hydroxy compound biosynthetic process
Gene Ontology
 GO:1901615 organic hydroxy compound metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901362 organic cyclic compound biosynthetic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0090407 organophosphate biosynthetic process
Gene Ontology
 GO:0072525 pyridine-containing compound biosynthetic process
Gene Ontology
 GO:0072524 pyridine-containing compound metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0071496 cellular response to external stimulus
Gene Ontology
 GO:0051716 cellular response to stimulus
Gene Ontology
 GO:0051188 obsolete cofactor biosynthetic process
Gene Ontology
 GO:0051186 obsolete cofactor metabolic process
Gene Ontology
 GO:0050896 response to stimulus
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0046184 aldehyde biosynthetic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0042823 pyridoxal phosphate biosynthetic process
Gene Ontology
 GO:0042822 pyridoxal phosphate metabolic process
Gene Ontology
 GO:0042819 vitamin B6 biosynthetic process
Gene Ontology
 GO:0042816 vitamin B6 metabolic process
Gene Ontology
 GO:0042364 water-soluble vitamin biosynthetic process
Gene Ontology
 GO:0040007 growth
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0033554 cellular response to stress
Gene Ontology
 GO:0032991 protein-containing complex
Gene Ontology
 GO:0031668 cellular response to extracellular stimulus
Gene Ontology
 GO:0019637 organophosphate metabolic process
Gene Ontology
 GO:0019438 aromatic compound biosynthetic process
Gene Ontology
 GO:0018130 heterocycle biosynthetic process
Gene Ontology
 GO:0017144 -
Gene Ontology
 GO:0016843 amine-lyase activity
Gene Ontology
 GO:0016840 carbon-nitrogen lyase activity
Gene Ontology
 GO:0016829 lyase activity
Gene Ontology
 GO:0009991 response to extracellular stimulus
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009605 response to external stimulus
Gene Ontology
 GO:0009432 SOS response
Gene Ontology
 GO:0009110 vitamin biosynthetic process
Gene Ontology
 GO:0009108 obsolete coenzyme biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008614 pyridoxine metabolic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0007154 cell communication
Gene Ontology
 GO:0006974 cellular response to DNA damage stimulus
Gene Ontology
 GO:0006950 response to stress
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006767 water-soluble vitamin metabolic process
Gene Ontology
 GO:0006766 vitamin metabolic process
Gene Ontology
 GO:0006732 obsolete coenzyme metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006081 cellular aldehyde metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:pdxT
Eggnog Ortholog
 EO:COG0311
Eggnog Description
 ED:Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
EC Number
 EC:4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing); PdxST kornec00750kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00750 Vitamin B6 metabolism
kornec01100 Metabolic pathways
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 71.4 %):

CTGGTGAGGGTCGGCGTCCTGGCCCTCCAGGGAGGGGTCGCCGAGCACCGCGAGGCACTGCACCGGCTCGGCGTCGAGACCACCCAGGTGCGCAGACCCGCCGATCTGGCGGGTCTGGACGGTATCGTCCTGCCCGGCGGCGAGTCCACCGTCATCGACAAGCTCGCCCGCACCTTCGGACTGGCCGAACCGCTCAGGGCGGCGATCGCGACGGGGCTGCCCACCCTGGCCACCTGCGCCGGGCTGATCTACCTGGCCTGCCGGATTCGAGGGGCCGCACCCGGCCAGCAGACCCTGGGGGTGCTGGACATCACCGTGAGACGCAATGCCTTCGGGACGCAGCTGGACTCCTTCGAGACCCTCCTGTCGGTCGACGGGGTCGCCGATCCGGTGCCGGCCACCTTCATCCGAGCCCCGGTCATCACCGAGCTGGGACCCGGTGTGCGTGCCGTGGCCCGACTGGACGAGAGTCGGGTGGTGGGGGTGCGCCAGGGCGCCGTCACCGGCTACTCCTTCCATCCCGAGGAGAGCACCGATCTGCGGGTGCACCGTGCCTGGATCGACTCCTGGGCGGCCTCGGGGGAGTTAGCGTCCTGA

Protein sequence:

MVRVGVLALQGGVAEHREALHRLGVETTQVRRPADLAGLDGIVLPGGESTVIDKLARTFGLAEPLRAAIATGLPTLATCAGLIYLACRIRGAAPGQQTLGVLDITVRRNAFGTQLDSFETLLSVDGVADPVPATFIRAPVITELGPGVRAVARLDESRVVGVRQGAVTGYSFHPEESTDLRVHRAWIDSWAASGELAS

GenBank Info

gene - pdxT
locus_tag - FAM19038-p1-1.1_002496
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015070568.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
protein_id - extdb:FAM19038-p1-1.1_002496

Gene Locus

Located on scaffold FAM19038-p1-1_scf1

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19038-p1-1.1_002495
FAM19038-p1-1.1_002497