update range to 10000 bp
locus tag: FAM19471-i1-1.1_000616 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001371 ATP-dependent Clp protease ATP-binding subunit ClpX
KEGG gene
 K03544 clpX, CLPX; ATP-dependent Clp protease ATP-binding subunit ClpX kornec04112
Gene Ontology
 GO:1901575 organic substance catabolic process
Gene Ontology
 GO:1901565 organonitrogen compound catabolic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901363 heterocyclic compound binding
Gene Ontology
 GO:1901265 nucleoside phosphate binding
Gene Ontology
 GO:0140096 catalytic activity, acting on a protein
Gene Ontology
 GO:0097367 carbohydrate derivative binding
Gene Ontology
 GO:0097159 organic cyclic compound binding
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0070011 -
Gene Ontology
 GO:0051301 cell division
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043168 anion binding
Gene Ontology
 GO:0043167 ion binding
Gene Ontology
 GO:0042623 -
Gene Ontology
 GO:0036094 small molecule binding
Gene Ontology
 GO:0035639 purine ribonucleoside triphosphate binding
Gene Ontology
 GO:0032559 adenyl ribonucleotide binding
Gene Ontology
 GO:0032555 purine ribonucleotide binding
Gene Ontology
 GO:0032553 ribonucleotide binding
Gene Ontology
 GO:0030554 adenyl nucleotide binding
Gene Ontology
 GO:0030163 protein catabolic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0017111 ribonucleoside triphosphate phosphatase activity
Gene Ontology
 GO:0017076 purine nucleotide binding
Gene Ontology
 GO:0016887 ATP hydrolysis activity
Gene Ontology
 GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
Gene Ontology
 GO:0016817 hydrolase activity, acting on acid anhydrides
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0016462 pyrophosphatase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009057 macromolecule catabolic process
Gene Ontology
 GO:0009056 catabolic process
Gene Ontology
 GO:0008233 peptidase activity
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0008144 obsolete drug binding
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006508 proteolysis
Gene Ontology
 GO:0005524 ATP binding
Gene Ontology
 GO:0005488 binding
Gene Ontology
 GO:0004176 ATP-dependent peptidase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Gene Ontology
 GO:0000166 nucleotide binding
Eggnog Protein
 EP:clpX
Eggnog Ortholog
 EO:COG1219
Eggnog Description
 ED:ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
Gene Code
 clpX
Gene Product
 ATP-dependent Clp protease ATP-binding subunit ClpX

Occurs in the following pathway maps:

Pathway Description
kornec04112 Cell cycle - Caulobacter

Sequences

Nucleotide sequence (GC-content: 52.1 %):

ATGTTTGAAGATACCACTGGACAAGATGTCCACTGTTCTTTTTGTGGGAAGTCTCAGTCGGAAGTGCAAAAGATCGTTGCCGGTCCCGGCGTGTTCATCTGTAATGAATGCGTGGCCCTGTGCCAAGAAATCATTGACCAGGAGCTAGCCGAGGACCGCACGGAAGCAGAAACGTTCACCGTTCCGACCCCGCAAGAAATTTTAAATCAATTAGATGACTACGTAATTGGTCAACAAGACGCTAAGAAGACCCTCGCCGTAGCCGTATACAACCACTACAAGCGGGTTAACGCCATGGTGACCGGTGATAATAACGATACCGAATTACAAAAGTCTAACATCGCCGTGATCGGGCCGACCGGGTCCGGGAAGACCTACTTGGCCCAATCGCTGGCCCGGATCCTAAACGTGCCGTTCGCCATTGCCGACGCCACCACCCTGACCGAAGCGGGTTACGTAGGGGAAGACGTTGAAAATATCATCTTAAAGCTCCTCCAAGCTGCCGATTTTGATATCGACCGGGCCGAAAAGGGGATCATCTACATCGATGAAATCGATAAGATTGCCAAGAAGAGCGAAAATGTTTCAATCACCCGGGACGTCTCCGGGGAAGGGGTTCAACAGGCCCTCTTAAAGATTCTGGAAGGCACGATCGCCAACGTTCCGCCGCAGGGTGGTCGTAAGCACCCGCAACAAGAGTTCATTCAGGTGGACACCAAGAACATCCTCTTCATTGTCGGGGGAGCCTTTGACGGGATTGAAACGATCGTCAAGGAACGCTTAGGGGATAAGACGATCGGGTTTGGGACCGACTCCAAGGAAATTAACGACGTGACTGAAAAGAATATCTTACAACACGTCATTCCAGAAGACCTACTGAAGTTTGGGCTGATCCCTGAATTTATCGGGCGCCTCCCAGTCATGACCGCCTTAGAAAAGCTTGATGAAGCCGACTTAGTGCGGATCCTGACGGAACCAAAGAACGCCCTGGTTAAGCAGTACCAAGAACTGATCCGCTTAGACGGGGCGGAACTACACTTCACGGCGGGGGCCCTGCAAGCAATGGCTAAGATGGCGATTGACCGGAACACGGGTGCCCGGGGGCTGCGTTCGATCATTGAAGACGTGATGCGCGACATCATGTTTGACTTACCAAGCCGCCAGGACGTGGTTAAGGTGGTCATCAATAAGGAATGCGTCACCAAGCACACCGCCCCAGAATACGTGTTGCAAAGCGACCAAGCATCCTAG

Protein sequence:

MFEDTTGQDVHCSFCGKSQSEVQKIVAGPGVFICNECVALCQEIIDQELAEDRTEAETFTVPTPQEILNQLDDYVIGQQDAKKTLAVAVYNHYKRVNAMVTGDNNDTELQKSNIAVIGPTGSGKTYLAQSLARILNVPFAIADATTLTEAGYVGEDVENIILKLLQAADFDIDRAEKGIIYIDEIDKIAKKSENVSITRDVSGEGVQQALLKILEGTIANVPPQGGRKHPQQEFIQVDTKNILFIVGGAFDGIETIVKERLGDKTIGFGTDSKEINDVTEKNILQHVIPEDLLKFGLIPEFIGRLPVMTALEKLDEADLVRILTEPKNALVKQYQELIRLDGAELHFTAGALQAMAKMAIDRNTGARGLRSIIEDVMRDIMFDLPSRQDVVKVVINKECVTKHTAPEYVLQSDQAS

GenBank Info

gene - clpX
locus_tag - FAM19471-i1-1.1_000616
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003671194.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ATP-dependent Clp protease ATP-binding subunit ClpX
protein_id - extdb:FAM19471-i1-1.1_000616

Gene Locus

Located on scaffold FAM19471-i1-1_scf8

FAM19471-i1-1.1_000615
FAM19471-i1-1.1_000617