update range to 10000 bp
locus tag: FAM19471-i1-1.1_000615 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 trigger factor
Ortholog
 N0.HOG0001370 trigger factor
KEGG gene
 K03545 tig; trigger factor
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:tig
Eggnog Ortholog
 EO:COG0544
Eggnog Description
 ED:Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase
EC Number
 EC:5.2.1.8 peptidylprolyl isomerase; PPIase; cyclophilin [misleading, see comments]; peptide bond isomerase; peptidyl-prolyl cis-trans isomerase

Sequences

Nucleotide sequence (GC-content: 51.1 %):

ATGTCAGTAAAATGGGAACGCGATAGCGACGCTCCAAAGGGGACGTTAACGTTCGATATCGACACTGAAACCATTCAAAAGGGGATTGACCACGCCTTTACCCGCACCCAAAAGCGGATTTCGGTTCCTGGCTTCCGTAAGGGCCACGTTCCGCGGACGATCTTCAACCAAATGTACGGGGAAGAATCCCTCTACCAAGATGCTTTAAACGACGTCTTACCGGATGCTTACGAAGCCGCCATCAAGGAAGCGGGCATCGAACCGGTCGACCAACCACAAGTTAACGTTGAAAGCATGGAAAAGGGTCAACCTTGGACCTTGACGGCCACTGTGGCGGTTAAGCCAGAAGTAACCTTGGGCGACTACAAGGGGATGGAAGTTCCTGAACAAGACACTTCCGTTTCCGACGCCGACGTTGACAGCGAATTAGAAAACAAGCGTCAACAACAAGCAGAACTGGTGCTTAAGGAAGACGAAGCAGCTGCCGACGGCGACACCGTTGTCATCGACTACGAAGGCTCCGTAGACGGGGAAAAGTTTGATGGCGGTTCCGCTGATAACTACTCCTTAGTTCTGGGTTCTGGCTCCTTTATCCCGGGCTTTGAAGACCAATTAGTTGGCCACAAGGCGGGCGAAGACGTGGACGTTAACGTTACCTTCCCAGAAGACTACCACGCTAAGGACTTAGCTGGTAAGGACGCCCTCTTCAAGGTTAAGATCCACGAAGTTAAGGAAAAGCAACTTCCGGAACTGGACGATGAATTTGCTAAGGACGTCGACGAAGACGTTGAAACCCTGGCCGAATTAAAGGACAAGGTTAAAAAGCAACTCCAAGACCAAAAGGAAGCCGCTGCTAAGGCAGCCATCGAAGACGCTGCGATTGAAGCAGCCGTTGCCAACGCCGAAACGGAAGAAATTCCGCAAGCCATGTTAGACGATGACACTAACCGTCAACTCCAACAATACTTGGCCGGCATGCAACAACAAGGGATCAACCCACAAATGTACTTCCAAATCACCAACACGACGGAAGACGACCTGCGCAAGCAATTTGCTGACGACGCAGCTAAGCGGGTGAAGACCAACTTGGTATTGGAAGCCGTTGTAAAGGATGCTAACCTAAACGCTACTGACGAAGACGTTCAAAACGAAATCGCTGACCTGGCAAAGCAATACGGGATGGACGAAGAAGCCGTATCCAAGGCTTTGACCCGCGACATGCTGGAACACGATATCGAAATCAAGAAGGCCGTTGACCTGATTGCGGATTCCGCAAAGCAAACCGCCAAGGCCGCTGACAAGGACTAA

Protein sequence:

MSVKWERDSDAPKGTLTFDIDTETIQKGIDHAFTRTQKRISVPGFRKGHVPRTIFNQMYGEESLYQDALNDVLPDAYEAAIKEAGIEPVDQPQVNVESMEKGQPWTLTATVAVKPEVTLGDYKGMEVPEQDTSVSDADVDSELENKRQQQAELVLKEDEAAADGDTVVIDYEGSVDGEKFDGGSADNYSLVLGSGSFIPGFEDQLVGHKAGEDVDVNVTFPEDYHAKDLAGKDALFKVKIHEVKEKQLPELDDEFAKDVDEDVETLAELKDKVKKQLQDQKEAAAKAAIEDAAIEAAVANAETEEIPQAMLDDDTNRQLQQYLAGMQQQGINPQMYFQITNTTEDDLRKQFADDAAKRVKTNLVLEAVVKDANLNATDEDVQNEIADLAKQYGMDEEAVSKALTRDMLEHDIEIKKAVDLIADSAKQTAKAADKD

GenBank Info

locus_tag - FAM19471-i1-1.1_000615
EC_number - 5.2.1.8
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003682058.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - trigger factor
protein_id - extdb:FAM19471-i1-1.1_000615

Gene Locus

Located on scaffold FAM19471-i1-1_scf8

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM19471-i1-1.1_000614
FAM19471-i1-1.1_000616