update range to 10000 bp
locus tag: FAM19471-i1-1.1_000669 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 ssb
Gene Product
 single-stranded DNA-binding protein
Ortholog
 N0.HOG0000574 single-stranded DNA-binding protein
KEGG gene
 K03111 ssb; single-strand DNA-binding protein kornec03030kornec03430kornec03440
Eggnog Protein
 EP:ssb
Eggnog Ortholog
 EO:COG0629
Eggnog Description
 ED:Plays an important role in DNA replication

Occurs in the following pathway maps:

Pathway Description
kornec03030 DNA replication
kornec03430 Mismatch repair
kornec03440 Homologous recombination

Sequences

Nucleotide sequence (GC-content: 48.3 %):

ATGATTAATCGAGTAGTGTTAACAGGTCGATTAACTAAGGACCTGGAATTGAAATACACGCAAAATGGAACGGCAGTTGCCCGGTTTACCTTAGCAGTTAGTCGGCAGTACAAGAATAAACAGACTGGCGAGCGAGAAACGGATTTTATCTCGTGCGAGGTTTGGCGTCAGCCAGCCGAGAACTTAGCTAAGTATGCCGGCAAGGGATCGTTGATTGGTGTTGATGGTCGGATTCAGACCAGCCACTACACCGACCGAGACGGAAAAGAGGTTTATCGAACGGATGTCAGGATTGATTCATTTGCCCTACTGTCATATCGGAATAATGACGCCAACCAGAGCGAGCAAACCGGCAATTACCAAGCTAATGTCAATTTCAATACGCCTCAGGAGCAACCTAATCTACCGCCATACGGTGGGATGTACGCCAACGGGACGCCAGCTAATGACGCTATCAATGGCCAAACGATTGACAGGATGGAAACCCACCAGCCGGCTGACATAACAGACTTACCTTTCTAG

Protein sequence:

MINRVVLTGRLTKDLELKYTQNGTAVARFTLAVSRQYKNKQTGERETDFISCEVWRQPAENLAKYAGKGSLIGVDGRIQTSHYTDRDGKEVYRTDVRIDSFALLSYRNNDANQSEQTGNYQANVNFNTPQEQPNLPPYGGMYANGTPANDAINGQTIDRMETHQPADITDLPF

GenBank Info

gene - ssb
locus_tag - FAM19471-i1-1.1_000669
inference - COORDINATES: similar to AA sequence:RefSeq:WP_016056202.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - single-stranded DNA-binding protein
protein_id - extdb:FAM19471-i1-1.1_000669

Gene Locus

Located on scaffold FAM19471-i1-1_scf8

FAM19471-i1-1.1_000668
FAM19471-i1-1.1_000670