locus tag:
FAM19471-i1-1.1_000670
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0004143 |
DNA replication protein |
|
|
Gene Product
|
helix-turn-helix domain-containing protein |
|
|
|
Eggnog Ortholog
|
EO:COG3935 |
|
|
|
Eggnog Description
|
ED:Psort location Cytoplasmic |
|
|
Sequences
Nucleotide sequence (GC-content: 44.2 %):
ATGCCAAAAGTAAAGAAGGTTAGGGCAAGGGGATTCACCCAAGTTGATAACCGGGTCATCGGCGATAAGCGGATGAGTCTCAAAGCATTAGGCCTGTTCACTTATATGTGGAGCAAACCTGATGATTGGGAGTTCTATGTATCCGTTATTAGCAATGACTTCAAAGACGGTCGCGACAGCATCCGGTCCGCAATCAACGAACTGATCAATCTCGGCTATGTTAAACGAACCAGGAAGCACAAAGAGAATGGACAGTTGGCTGCTTACGATTACATTCTCTTTGATGAACCTAAGACGGAAAAGCCGTCACAGGCGGTCACCTATGACGGAAAAACCTACGTAGGGAAAACCTACGTAGGAAAATCCGCCACTACTAATACTTACTGTACTAATACTAACTTAACTAATGATTGGCTGATTGATAATAAATTAAGCTCATTACCTGAGAAGCTGGGCGAAACTGAACGACAATGGGGCATGTTATCCACCAAAACAAAAGGGAGCCTGGAGGGATTAGCCAGGCAGTTTGGTCCCCAAGTAGTCGGTGAAGGGCTACAAGCTTTTAACGAGAACGGTCAGTACAAATCAGGTCTGGTTAAGTACATCAAAAAGTACATTGAAAGCCAAAAAGCAGGACCGGAGCCGCTTAAGCTTAGTGCATCCTTAGTTAAGCTGGAAAGAAGAAAAATCTAA
Protein sequence:
MPKVKKVRARGFTQVDNRVIGDKRMSLKALGLFTYMWSKPDDWEFYVSVISNDFKDGRDSIRSAINELINLGYVKRTRKHKENGQLAAYDYILFDEPKTEKPSQAVTYDGKTYVGKTYVGKSATTNTYCTNTNLTNDWLIDNKLSSLPEKLGETERQWGMLSTKTKGSLEGLARQFGPQVVGEGLQAFNENGQYKSGLVKYIKKYIESQKAGPEPLKLSASLVKLERRKI
GenBank Info
locus_tag - FAM19471-i1-1.1_000670
inference - COORDINATES: ab initio prediction:GeneMarkS-2+
note - Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon_start - 1
transl_table - 11
product - helix-turn-helix domain-containing protein
protein_id - extdb:FAM19471-i1-1.1_000670
Gene Locus
Located on scaffold FAM19471-i1-1_scf8
FAM19471-i1-1.1_000669
