update range to 10000 bp
locus tag: FAM19471-i1-1.1_000711 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 uracil phosphoribosyltransferase
Gene Code
 upp
KEGG reaction
 R00966 UMP:diphosphate phospho-alpha-D-ribosyltransferase; UMP + Diphosphate <=> Uracil + 5-Phospho-alpha-D-ribose 1-diphosphate kornec00240kornec01100
Ortholog
 N0.HOG0001256 uracil phosphoribosyltransferase
KEGG gene
 K00761 upp, UPRT; uracil phosphoribosyltransferase [EC:2.4.2.9] kornec00240kornec01100
Gene Ontology
 GO:1901659 glycosyl compound biosynthetic process
Gene Ontology
 GO:1901657 glycosyl compound metabolic process
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901362 organic cyclic compound biosynthetic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:1901293 nucleoside phosphate biosynthetic process
Gene Ontology
 GO:1901137 carbohydrate derivative biosynthetic process
Gene Ontology
 GO:1901135 carbohydrate derivative metabolic process
Gene Ontology
 GO:0090407 organophosphate biosynthetic process
Gene Ontology
 GO:0072528 pyrimidine-containing compound biosynthetic process
Gene Ontology
 GO:0072527 pyrimidine-containing compound metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0055086 nucleobase-containing small molecule metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0046390 ribose phosphate biosynthetic process
Gene Ontology
 GO:0046134 pyrimidine nucleoside biosynthetic process
Gene Ontology
 GO:0046132 pyrimidine ribonucleoside biosynthetic process
Gene Ontology
 GO:0046131 pyrimidine ribonucleoside metabolic process
Gene Ontology
 GO:0046049 UMP metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044283 small molecule biosynthetic process
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043174 nucleoside salvage
Gene Ontology
 GO:0043097 pyrimidine nucleoside salvage
Gene Ontology
 GO:0043094 cellular metabolic compound salvage
Gene Ontology
 GO:0042455 ribonucleoside biosynthetic process
Gene Ontology
 GO:0034654 nucleobase-containing compound biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0034404 nucleobase-containing small molecule biosynthetic process
Gene Ontology
 GO:0019693 ribose phosphate metabolic process
Gene Ontology
 GO:0019637 organophosphate metabolic process
Gene Ontology
 GO:0019438 aromatic compound biosynthetic process
Gene Ontology
 GO:0019206 nucleoside kinase activity
Gene Ontology
 GO:0019205 nucleobase-containing compound kinase activity
Gene Ontology
 GO:0018130 heterocycle biosynthetic process
Gene Ontology
 GO:0016772 transferase activity, transferring phosphorus-containing groups
Gene Ontology
 GO:0016740 transferase activity
Gene Ontology
 GO:0016310 phosphorylation
Gene Ontology
 GO:0016301 kinase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009260 ribonucleotide biosynthetic process
Gene Ontology
 GO:0009259 ribonucleotide metabolic process
Gene Ontology
 GO:0009220 pyrimidine ribonucleotide biosynthetic process
Gene Ontology
 GO:0009218 pyrimidine ribonucleotide metabolic process
Gene Ontology
 GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process
Gene Ontology
 GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process
Gene Ontology
 GO:0009165 nucleotide biosynthetic process
Gene Ontology
 GO:0009163 nucleoside biosynthetic process
Gene Ontology
 GO:0009161 ribonucleoside monophosphate metabolic process
Gene Ontology
 GO:0009156 ribonucleoside monophosphate biosynthetic process
Gene Ontology
 GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process
Gene Ontology
 GO:0009129 pyrimidine nucleoside monophosphate metabolic process
Gene Ontology
 GO:0009124 nucleoside monophosphate biosynthetic process
Gene Ontology
 GO:0009123 nucleoside monophosphate metabolic process
Gene Ontology
 GO:0009119 ribonucleoside metabolic process
Gene Ontology
 GO:0009117 nucleotide metabolic process
Gene Ontology
 GO:0009116 nucleoside metabolic process
Gene Ontology
 GO:0009112 nucleobase metabolic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008655 pyrimidine-containing compound salvage
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006796 phosphate-containing compound metabolic process
Gene Ontology
 GO:0006793 phosphorus metabolic process
Gene Ontology
 GO:0006753 nucleoside phosphate metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006222 UMP biosynthetic process
Gene Ontology
 GO:0006221 pyrimidine nucleotide biosynthetic process
Gene Ontology
 GO:0006220 pyrimidine nucleotide metabolic process
Gene Ontology
 GO:0006213 pyrimidine nucleoside metabolic process
Gene Ontology
 GO:0006206 pyrimidine nucleobase metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004849 uridine kinase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:upp
Eggnog Ortholog
 EO:COG0035
Eggnog Description
 ED:Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
EC Number
 EC:2.4.2.9 uracil phosphoribosyltransferase; UMP pyrophosphorylase; UPRTase; UMP:pyrophosphate phosphoribosyltransferase; uridine 5'-phosphate pyrophosphorylase; uridine monophosphate pyrophosphorylase; uridylate pyrophosphorylase; uridylic pyrophosphorylase kornec00240kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00240 Pyrimidine metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 52.2 %):

ATGGGTAAATTTGAGGTGCTGGATCACCCGCTAATTCAACATAAGTTAACGATGATTCGCGACAAGCGGGTCGGAACGAAGGTCTTCCGGGAAACGGTCAAGGAAATTTCAACCTTGATGGCCTACGAAGTTTCCCGTAACATGCCCCTAAAGGACGTTGAAGTGGAAACGCCAATTGCCAAAACCACTCAAAAGGAATTGGCTGGGAAAAAGGTAGCCATCATTCCGATCTTACGGGCCGGCCTGGGGATGGTCGATGGGATGACCGAATTGATCCCAGCAGCCAAAATTGGCTTTATTGGGATGTACCGGGATGAAGAAACCTTGAAGCCGCACGAATACTTCGTAAAGTTGCCAAACGACATTACGGAACGGCAACTCTTCATCGTTGACCCGATGCTTGCGACCGGTGGGTCAGCCGTAATGGCCATCGAAGCCCTAAAGAAGCGGGGCTGCCAAGAAAAGAACATGAAGTTTGCCTGCTTAGTAGCGGCGCCAGAAGGGGTTAAGGCGGTTCAAGAGGCCTTCCCGGATGTTGATATCTACACGGCTGGGCTGGACGAACGCTTAAACGAAGATGGTTACATTGTGCCAGGCCTCGGGGACGCGGGGGACCGCCTCTTCGGGACCAAGTAG

Protein sequence:

MGKFEVLDHPLIQHKLTMIRDKRVGTKVFRETVKEISTLMAYEVSRNMPLKDVEVETPIAKTTQKELAGKKVAIIPILRAGLGMVDGMTELIPAAKIGFIGMYRDEETLKPHEYFVKLPNDITERQLFIVDPMLATGGSAVMAIEALKKRGCQEKNMKFACLVAAPEGVKAVQEAFPDVDIYTAGLDERLNEDGYIVPGLGDAGDRLFGTK

GenBank Info

gene - upp
locus_tag - FAM19471-i1-1.1_000711
EC_number - 2.4.2.9
inference - COORDINATES: similar to AA sequence:RefSeq:WP_006916904.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - uracil phosphoribosyltransferase
protein_id - extdb:FAM19471-i1-1.1_000711

Gene Locus

Located on scaffold FAM19471-i1-1_scf9

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_000710
FAM19471-i1-1.1_000712