locus tag:
FAM19471-i1-1.1_000715
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Code
|
prfA |
|
|
|
Gene Product
|
peptide chain release factor 1 |
|
|
|
Ortholog
|
N0.HOG0001258 |
peptide chain release factor 1 |
|
|
KEGG gene
|
K02835 |
prfA, MTRF1, MRF1; peptide chain release factor 1 |
|
|
Eggnog Protein
|
EP:prfA |
|
|
|
Eggnog Ortholog
|
EO:COG0216 |
|
|
|
Eggnog Description
|
ED:Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA |
|
|
Sequences
Nucleotide sequence (GC-content: 52.8 %):
ATGGAAATGGAAGAAATTTTCGATAAGTTACAAGCCGTGGCCGACCGCTACGATGAACTTAACGAGTTGATCTCGGATCCCGAAGTAATCGCCGACTCCCAACGGTTCATGAAGCTCTCAAAGGAAGAAGGGAGCCTACGCGAAACCGTTGAAAAATACAACGAGTACAAGGAAGTCACCCAAACGATTAAGGATGACACCGAGATGTTGCGCGAAGAAAGCGACCCCGACCTGGTGGAAATGACCAAAGAGGAGCTTAACGAAGCCAAGGAACGCCAAGCCCAGCTCCAAGATGAACTGGAAGTCTTGTTAATTCCAAAGGACCCGAATGATGATAAAAACATCATTATGGAAATTCGGGGGGCCGCTGGTGGGGACGAAGCCTCCCTGTTTGCCGCCGATCTGTATAACATGTACGTTCGCTACGCCGAAAAGCAGGGGTGGAACGTTGAAGTGGTTGACCGCAACGAAACCGAAGTCGGCGGGTTCAAGGAAATCGCCCTGATAATTACCGGTGACCAGGTTTACTCCAAGCTGAAGTTTGAAAACGGGGCGCATCGGGTACAACGGATTCCGGCGACCGAATCGGCGGGCCGGGTGCACACGTCGACGGCGACCGTGGGGGTAATGCCGGAAGCCGAAGACGTTGACGTGGACCTGGATCCAAAGGACATCCGGGTCGACGTTTACCGCTCTTCTGGGGCCGGTGGTCAGCACATTAACAAGACCTCCTCGGCCGTACGGATGACCCACTTGCCAACGGGGATCGTGGTGGCAATGCAAGACGAGCGTTCCCAACAGCAAAACCGGGCCAAGGCAATGCAGATTTTAAAGGCCCGGGTTTACGATTACTACCAACAACAAGAACAGTCTGAATACGATGCCCAACGTAAAAACGCGATTGGGACCGGGGACCGTTCGGAACGAATCCGGACGTACAACTACCCGCAAAACCGGGTTACCGACCACCGGATTGGCCTGACCCTAAACAAGCTCGATAAGATCATGGCTGGTGACCTAGAAGAAATCATCGAAGCGCTAATCATTGCCGATCAGGCCCAAAAGCTGGAGCAATTACGCAATGAGTAA
Protein sequence:
MEMEEIFDKLQAVADRYDELNELISDPEVIADSQRFMKLSKEEGSLRETVEKYNEYKEVTQTIKDDTEMLREESDPDLVEMTKEELNEAKERQAQLQDELEVLLIPKDPNDDKNIIMEIRGAAGGDEASLFAADLYNMYVRYAEKQGWNVEVVDRNETEVGGFKEIALIITGDQVYSKLKFENGAHRVQRIPATESAGRVHTSTATVGVMPEAEDVDVDLDPKDIRVDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNRAKAMQILKARVYDYYQQQEQSEYDAQRKNAIGTGDRSERIRTYNYPQNRVTDHRIGLTLNKLDKIMAGDLEEIIEALIIADQAQKLEQLRNE
GenBank Info
gene - prfA
locus_tag - FAM19471-i1-1.1_000715
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003717655.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - peptide chain release factor 1
protein_id - extdb:FAM19471-i1-1.1_000715
Gene Locus
Located on scaffold FAM19471-i1-1_scf9
FAM19471-i1-1.1_000714
