update range to 10000 bp
locus tag: FAM19471-i1-1.1_000746 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R04773 Selenomethionine:tRNAMet ligase (AMP-forming); ATP + L-Selenomethionine + tRNA(Met) <=> AMP + Diphosphate + Selenomethionyl-tRNA(Met) kornec00450kornec01100
KEGG reaction
 R03659 L-Methionine:tRNAMet ligase (AMP-forming); ATP + L-Methionine + tRNA(Met) <=> AMP + Diphosphate + L-Methionyl-tRNA kornec00970
Ortholog
 N0.HOG0001354 methionine--tRNA ligase
Gene Product
 methionine--tRNA ligase
Gene Code
 metG
KEGG gene
 K01874 MARS, metG; methionyl-tRNA synthetase [EC:6.1.1.10] kornec00450kornec00970kornec01100
Gene Ontology
 GO:1901576 organic substance biosynthetic process
Gene Ontology
 GO:1901566 organonitrogen compound biosynthetic process
Gene Ontology
 GO:1901564 organonitrogen compound metabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140101 catalytic activity, acting on a tRNA
Gene Ontology
 GO:0140098 catalytic activity, acting on RNA
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0044281 small molecule metabolic process
Gene Ontology
 GO:0044271 cellular nitrogen compound biosynthetic process
Gene Ontology
 GO:0044267 -
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044249 cellular biosynthetic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043604 amide biosynthetic process
Gene Ontology
 GO:0043603 cellular amide metabolic process
Gene Ontology
 GO:0043436 oxoacid metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0043043 peptide biosynthetic process
Gene Ontology
 GO:0043039 tRNA aminoacylation
Gene Ontology
 GO:0043038 amino acid activation
Gene Ontology
 GO:0034660 ncRNA metabolic process
Gene Ontology
 GO:0034645 cellular macromolecule biosynthetic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0019752 carboxylic acid metabolic process
Gene Ontology
 GO:0019538 protein metabolic process
Gene Ontology
 GO:0016875 ligase activity, forming carbon-oxygen bonds
Gene Ontology
 GO:0016874 ligase activity
Gene Ontology
 GO:0016070 RNA metabolic process
Gene Ontology
 GO:0010467 gene expression
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009059 macromolecule biosynthetic process
Gene Ontology
 GO:0009058 biosynthetic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006520 cellular amino acid metabolic process
Gene Ontology
 GO:0006518 peptide metabolic process
Gene Ontology
 GO:0006431 methionyl-tRNA aminoacylation
Gene Ontology
 GO:0006418 tRNA aminoacylation for protein translation
Gene Ontology
 GO:0006412 translation
Gene Ontology
 GO:0006399 tRNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0006082 organic acid metabolic process
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Gene Ontology
 GO:0004825 methionine-tRNA ligase activity
Gene Ontology
 GO:0004812 aminoacyl-tRNA ligase activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:metG
Eggnog Ortholog
 EO:COG0143
Eggnog Description
 ED:Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
EC Number
 EC:6.1.1.10 methionine---tRNA ligase; methionyl-tRNA synthetase; methionyl-transfer ribonucleic acid synthetase; methionyl-transfer ribonucleate synthetase; methionyl-transfer RNA synthetase; methionine translase; MetRS kornec00450kornec00970kornec01100

Occurs in the following pathway maps:

Pathway Description
kornec00450 Selenocompound metabolism
kornec00970 Aminoacyl-tRNA biosynthesis
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 53.5 %):

TTGGTTCGAAATCGGCGTGGCTTTTTGCTATACTGGAAGTTAACGAAAAAACGATTATCGGAAAAGAGGTCCCGCTGTATGGCTGAACAACCAACCTACTACATCACAACACCAATCTATTACCCATCCGGACGACTTCACATCGGTAACTCCTACACGACGGTTGCCTGTGACGCCGAGGCCCGCTTCAAGCGGCTCAGTGGTTTTGACGTGTTCTTTTTAACCGGGACGGACGAACACGGGCTAAAGATTGAACAAAAGGCCGAAAAATTAGGTAAGGATCCGCAAACCTACGTCGATGAAATGGCGGCTGGTATCAAGGAACTGTGGCAAAAACTGGAAATCACCAACGACAAGTTTATCCGCACCACCGATGGCTACCACGAAGCCGCCGTTCAAAAGATCTTCCAACAACTCCTCGACCAAGGAGATATCTACAAGGGCGAATACGTGGGCTGGTACTCGGTCGATGACGAAGAGTACTTCACCGAAAGCCAACTCAAGGAAGTCTTCAAGGACGAAAACGGCCAGGTAACCGGTGGGATTGCCCCGTCTGGCCACGAAGTTCAACTGGTGAAAGAAGAGTCCTACTTCTTTAAGATGAGCAAGTACGCCGATTGGCTGATGGACTACTATAAGGCCCACCCCGACTTCATCCAGCCAGAATCGCGGATGAACGAAATGGTTAAGAACTTCTTGGAACCAGGCTTAGAGGACCTGGCCGTAACCCGGACCTCCTTTAACTGGGGGGTCAAGGTGCCAAACGACCCGAAGCACGTGGTCTACGTGTGGATCGACGCCTTATCCAACTATATTACCGCCCTGGGCTACGGCAGCGACGACGACAGCCTCTTTAAGAAGTACTGGCCAGCCGACGTTCACATGGTTGGTAAAGAAATTGTCCGGTTCCACACCATTTACTGGCCAATCATACTCCACGCCCTGGGCTTGCCACTGCCTAAGCACGTCATCGGCCACGGCTGGTTGACGATGAAGGACGGCAAGATGTCCAAGTCCAAGGGGAACGTGGTTTACCCAGAAACCCTGATTGACCGTTACGGCTTAGACGCCACCCGTTACTACCTGTTACGGGCGATGCCGTTTGGAAATGACGGGGTCTTCTCACCGGAAGACTTCGTCGAAAAGGTTAACTACGACCTGGCTAACGACCTGGGGAACCTCTTGAACCGGACCGTGGCGATGGTTAACAAGTACCAAGCCGGCAAGTTGGTGGGTCAACCAGGGGCCACGACCGACTTTGATGCTGACTTAGAGCAAGTGGCCCAAGACGCCCTGGTGGAATACCGGGAATTGATGGATCAGACCCGCTTTGCCGACGCCCTGTCCGCCATCTGGAAGTTGATCGCCCGGGCCAACAAGTACATTGACGAAACCGAACCGTGGGTCTTGGCCAAGGATGAACAACAAGCACCCGTCTTAAGCGATGTTTTGACCCACCTGGCCAAGTCATTGCGGATGGTAGCGGCCATGCTGCAACCAATCATGCCAACGGCACCCAAGGAAATCCTGGGCCAACTGGGCCTAGCCAAGGAAGCCATTTCCCTCTCTGACCTCTCCTTTAATGACTTCCCGGCCGAAGTAGTGGTGGTTGAAAAGGGAACGCCGATCTTCCCACGGCGCGACATCCAAGAAGAAGTCGACTTCATTAAGTCCCAAATGAGTGCCAACGAAAAGCAAAAGGGGCGCAAGGCCATGGAAGCGGCCAAGACTGCTAGCGTTGACCCAGTCAAAGCCGAAATCCAGTTTGACGACTTTGACAAGGTGGACCTGCGGGTCGGCTTGATTAAGGAAGCCGGCAAGGTGAAGGGCGCTGATAAGTTGCTGAAGTTCACCCTCGACGACGGCATGGGCGGGCGCCAAATCCTGTCCGGGATCGCTAAGTGGTACCCAGTACCGGAAGAACTGGTGGGTAAGAAGGTCGTCTTCGTGGCCAACCTGGCTCCCCGCAAGCTCCGTGGTGAAATTAGCCAGGGGATGCTCTTATCCTCTGAATTAAACGGCCAGGTACAACTAGTGTTAGTTCCAGACAGCCTGGAAGTTGGCTCGACGGTCTGCTAA

Protein sequence:

MVRNRRGFLLYWKLTKKRLSEKRSRCMAEQPTYYITTPIYYPSGRLHIGNSYTTVACDAEARFKRLSGFDVFFLTGTDEHGLKIEQKAEKLGKDPQTYVDEMAAGIKELWQKLEITNDKFIRTTDGYHEAAVQKIFQQLLDQGDIYKGEYVGWYSVDDEEYFTESQLKEVFKDENGQVTGGIAPSGHEVQLVKEESYFFKMSKYADWLMDYYKAHPDFIQPESRMNEMVKNFLEPGLEDLAVTRTSFNWGVKVPNDPKHVVYVWIDALSNYITALGYGSDDDSLFKKYWPADVHMVGKEIVRFHTIYWPIILHALGLPLPKHVIGHGWLTMKDGKMSKSKGNVVYPETLIDRYGLDATRYYLLRAMPFGNDGVFSPEDFVEKVNYDLANDLGNLLNRTVAMVNKYQAGKLVGQPGATTDFDADLEQVAQDALVEYRELMDQTRFADALSAIWKLIARANKYIDETEPWVLAKDEQQAPVLSDVLTHLAKSLRMVAAMLQPIMPTAPKEILGQLGLAKEAISLSDLSFNDFPAEVVVVEKGTPIFPRRDIQEEVDFIKSQMSANEKQKGRKAMEAAKTASVDPVKAEIQFDDFDKVDLRVGLIKEAGKVKGADKLLKFTLDDGMGGRQILSGIAKWYPVPEELVGKKVVFVANLAPRKLRGEISQGMLLSSELNGQVQLVLVPDSLEVGSTVC

GenBank Info

gene - metG
locus_tag - FAM19471-i1-1.1_000746
EC_number - 6.1.1.10
inference - COORDINATES: similar to AA sequence:RefSeq:WP_008121135.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - methionine--tRNA ligase
protein_id - extdb:FAM19471-i1-1.1_000746

Gene Locus

Located on scaffold FAM19471-i1-1_scf10

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
FAM19471-i1-1.1_000745
FAM19471-i1-1.1_000747