update range to 10000 bp
locus tag: FAM19471-i1-1.1_000745 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Product
 TatD family hydrolase
Ortholog
 N0.HOG0001174 TatD family hydrolase
KEGG gene
 K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
Gene Ontology
 GO:1901575 organic substance catabolic process
Gene Ontology
 GO:1901361 organic cyclic compound catabolic process
Gene Ontology
 GO:1901360 organic cyclic compound metabolic process
Gene Ontology
 GO:0140097 catalytic activity, acting on DNA
Gene Ontology
 GO:0090305 nucleic acid phosphodiester bond hydrolysis
Gene Ontology
 GO:0090304 nucleic acid metabolic process
Gene Ontology
 GO:0071704 organic substance metabolic process
Gene Ontology
 GO:0046700 heterocycle catabolic process
Gene Ontology
 GO:0046483 heterocycle metabolic process
Gene Ontology
 GO:0044270 cellular nitrogen compound catabolic process
Gene Ontology
 GO:0044265 cellular macromolecule catabolic process
Gene Ontology
 GO:0044260 cellular macromolecule metabolic process
Gene Ontology
 GO:0044248 cellular catabolic process
Gene Ontology
 GO:0044238 primary metabolic process
Gene Ontology
 GO:0044237 cellular metabolic process
Gene Ontology
 GO:0043170 macromolecule metabolic process
Gene Ontology
 GO:0034655 nucleobase-containing compound catabolic process
Gene Ontology
 GO:0034641 cellular nitrogen compound metabolic process
Gene Ontology
 GO:0019439 aromatic compound catabolic process
Gene Ontology
 GO:0016788 hydrolase activity, acting on ester bonds
Gene Ontology
 GO:0016787 hydrolase activity
Gene Ontology
 GO:0009987 cellular process
Gene Ontology
 GO:0009057 macromolecule catabolic process
Gene Ontology
 GO:0009056 catabolic process
Gene Ontology
 GO:0008152 metabolic process
Gene Ontology
 GO:0008150 biological_process
Gene Ontology
 GO:0006807 nitrogen compound metabolic process
Gene Ontology
 GO:0006725 cellular aromatic compound metabolic process
Gene Ontology
 GO:0006308 DNA catabolic process
Gene Ontology
 GO:0006259 DNA metabolic process
Gene Ontology
 GO:0006139 nucleobase-containing compound metabolic process
Gene Ontology
 GO:0004536 deoxyribonuclease activity
Gene Ontology
 GO:0004518 nuclease activity
Gene Ontology
 GO:0003824 catalytic activity
Gene Ontology
 GO:0003674 molecular_function
Eggnog Protein
 EP:tatD
Eggnog Ortholog
 EO:COG0084
Eggnog Description
 ED:hydrolase

Sequences

Nucleotide sequence (GC-content: 56.8 %):

ATGACGATTAAGATTTACGATTCGCACACCCACTTAAACGATGAGGCCTTTTACGGTGACGTAGGGGCCTTTTTGGCCCGGGCTAAACATTACGGGGTTACCGAGCTGAACATGATTGGCTCCAACCGGCTGTTAAACGACCGCGCCCTTAAACTAGCTAGCACCTACCCGGGCTTGCACGCCGTAATCGGCTTTCACCCCGAGGACCTAGCGGAAGTAACCCCGACCGATTGGGAGGGGCTAAAAAAGGCGTTGCGACGTCCCGAGGTTGTGGGGGTGGGCGAAGTCGGCTTAGACTTTGTCAACGGAATCGCCGACCACCGGGCCCAAGAAGCCGCCCTAGTTGAACAAATTGACCTGGCTAACCAGCTAAGCTTACCGGTGGTGATCCACTGCCGCGAGGCCCTGGCCGAAACATACCGGGTCCTAGTGGAGCACCCGGTTAAAGCGGGGGGCGTGATGCACTCCTTTAGCGGTGACGCAGCGTGGGCGGAAAAGTTCCTTGACCTGGACTTTGACCTCTCCTACAGCGGGGTGGTCTCCTTTACCAAGGCAACGGAAGTTCACGAAGCCGCCAAGGTAACCCCTTTGGAGCGGATGATGGTAGAAACGGACGCACCCTACCTGACCCCGGTTCCGTACCGGGGGAAGCAAAACGAGCCCGCCTTCACCTACTTTGTGGTCGAAGCGCTGGCCAAACTCTTGCAACGCTCCGTAGAAGAGGTGGCCTCAGCGACGTTGCAGACCGCGACAAACCGGTTTTTGAAAGGACATAATGGACAAGATTAA

Protein sequence:

MTIKIYDSHTHLNDEAFYGDVGAFLARAKHYGVTELNMIGSNRLLNDRALKLASTYPGLHAVIGFHPEDLAEVTPTDWEGLKKALRRPEVVGVGEVGLDFVNGIADHRAQEAALVEQIDLANQLSLPVVIHCREALAETYRVLVEHPVKAGGVMHSFSGDAAWAEKFLDLDFDLSYSGVVSFTKATEVHEAAKVTPLERMMVETDAPYLTPVPYRGKQNEPAFTYFVVEALAKLLQRSVEEVASATLQTATNRFLKGHNGQD

GenBank Info

locus_tag - FAM19471-i1-1.1_000745
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015638551.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - TatD family hydrolase
protein_id - extdb:FAM19471-i1-1.1_000745

Gene Locus

Located on scaffold FAM19471-i1-1_scf10

FAM19471-i1-1.1_000744
FAM19471-i1-1.1_000746