update range to 10000 bp
locus tag: FAM19471-i1-1.1_000774 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R01388 D-Glycerate:NAD+ 2-oxidoreductase; D-Glycerate + NAD+ <=> Hydroxypyruvate + NADH + H+ kornec00260kornec00630kornec00680kornec01100kornec01110kornec01120kornec01200
KEGG reaction
 R00717 Glycolate:NAD+ oxidoreductase; Glycolate + NAD+ <=> Glyoxylate + NADH + H+ kornec00630kornec01100kornec01120
Ortholog
 N0.HOG0000314 hydroxyacid dehydrogenase
KEGG gene
 K00015 gyaR, GOR1; glyoxylate reductase [EC:1.1.1.26] kornec00630kornec01100kornec01110kornec01120
Gene Product
 hydroxyacid dehydrogenase
Eggnog Ortholog
 EO:COG1052
Eggnog Description
 ED:Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
EC Number
 EC:1.1.1.26 glyoxylate reductase; NADH-glyoxylate reductase; glyoxylic acid reductase; NADH-dependent glyoxylate reductase kornec00630kornec01100kornec01110kornec01120

Occurs in the following pathway maps:

Pathway Description
kornec00260 Glycine, serine and threonine metabolism
kornec00630 Glyoxylate and dicarboxylate metabolism
kornec00680 Methane metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01200 Carbon metabolism

Sequences

Nucleotide sequence (GC-content: 56.2 %):

ATGGCAACTGTATACATGACGGCGGCCTTTCCGGACGTCGCAAGCAAGGTGTTGGATGAAGCGGGGATCGACCACGATGGTTTTAGTGGCGAAGGCCTGATCACCAAAGAGGAACTACTCAAGCACGTGGGCGACGTGAAGGTCTTGATTACGCCACTGTCAACCAAGGTCGATCAAGACGTCATCGATGCGGCCCCAAACCTGAAGCTGATCGCTAACTTTGGGGCTGGCTTTAACAACATCGATACCGCCTACGCCCGCAAGAAGGGGATCGACGTGACCAACACCCCCTTTGTTTCCTCGGTGGCGACCGCTGAAATCGCTAGTGGACTAGCAATTGCCCTGTCACGGCGGATTGTGGAAGGTGACCACGTGATGCGGACGGTCGGTTTTGATGGCTGGGCGCCGCTGTTCTTCCGGGGGCACGAACTAGCGGGTAAAACGCTAGGGATCGTTGGCTTAGGTGATATCGGTAAAAACGTTGCCCAACGCCTGGCTGCCTTTGATATGAAGATCCTCTACACCCAACGTCACCAGGCCGACCCAGCGGTGGAAGCACATTACGGCGCCACCTACGTTAGCCTAGACGAACTGCTGGAGCAAAGCGATATTGTGTCCCTGCACTGCCCATTAACGCCGGCGACCACCCACATGATCGCGGCGCCGCAGTTTAAACAGATGAAGGACAACGCCCTGTTGATCAACTGTGCCCGGGGACCGGTCATTGCGGAAGCCGACCTGTTAGTTGCCCTCAAGAACCATGACATCGCCGGGGCGGCCCTTGACGTTTACGAAGCAGAACCAGAAGTGGCGGACGAATTTAAGCACCTCGCTAACGTCATCTTGACCCCGCACATCGGGAACGCCTCCTATGAAGCGCGGGATGCGATGGCTAAAATAGTGACGACCAACGCCGCCCGGGTGTTAGCGGGTAAACAACCGCAATACGTGGTAAACGGAAATAACGACTAG

Protein sequence:

MATVYMTAAFPDVASKVLDEAGIDHDGFSGEGLITKEELLKHVGDVKVLITPLSTKVDQDVIDAAPNLKLIANFGAGFNNIDTAYARKKGIDVTNTPFVSSVATAEIASGLAIALSRRIVEGDHVMRTVGFDGWAPLFFRGHELAGKTLGIVGLGDIGKNVAQRLAAFDMKILYTQRHQADPAVEAHYGATYVSLDELLEQSDIVSLHCPLTPATTHMIAAPQFKQMKDNALLINCARGPVIAEADLLVALKNHDIAGAALDVYEAEPEVADEFKHLANVILTPHIGNASYEARDAMAKIVTTNAARVLAGKQPQYVVNGNND

GenBank Info

locus_tag - FAM19471-i1-1.1_000774
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003686397.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - hydroxyacid dehydrogenase
protein_id - extdb:FAM19471-i1-1.1_000774

Gene Locus

Located on scaffold FAM19471-i1-1_scf10

FAM19471-i1-1.1_000773
FAM19471-i1-1.1_000775