locus tag:
FAM19471-i1-1.1_000791
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
ribosome biogenesis GTPase Der |
|
|
|
Ortholog
|
N0.HOG0001215 |
ribosome biogenesis GTPase Der |
|
|
KEGG gene
|
K03977 |
engA, der; GTPase |
|
|
Eggnog Protein
|
EP:der |
|
|
|
Eggnog Ortholog
|
EO:COG1160 |
|
|
|
Eggnog Description
|
ED:GTPase that plays an essential role in the late steps of ribosome biogenesis |
|
|
Sequences
Nucleotide sequence (GC-content: 56.1 %):
ATGGCAAATCCAGTAGTAGCGATTGTCGGACGCCCGAACGTGGGGAAGTCGACCCTCTTTAACCGGATCGCCGGGGAGCGGATCGCAATCGTTGAAGACACCCCCGGAGTAACCCGGGATCGCCTCTACGCCCACGGGGAATGGCTGGGCAAAAACTTTTCGATGATTGACACCGGGGGGATTGAAATGTCCGATCAACCCCTCTTAACGCAGATCCGGCAACAGGCTGAAATCGCGATTGAAGAAGCCGATGTGATCATCATGGTCGTTAACGTTGAAAACGGGGTGACCGATGCCGACGAGCAGGTGGCCCAAATTCTCTACCGGTCCAACAAGCCGGTCGTCTTGGCCGTCAATAAGGTTGATAACCCCGAGCGGCGGCTCGACGTTTATGACTTTTACCAACTTGGTTTAGGTGAACCGTACCCGGTTTCGTCCGTTCACGGGGTTGGCCTTGGTGATATGCTCGACGCCGTGATTGAAAACTTTGCCGAAAAGGACGCCGAAGAAGAGGACGACCGGATTCGCTTTTCCTTTATCGGGCGGCCCAACGTCGGTAAGTCCTCGCTCGTTAACGCCATCCTAGGCGAAAACCGGGTGATCGTTTCGGACATGGCCGGGACGACCCGTGATGCGATTAACACCCAGTTTACGGCGAAGGACGGTCGCGAATTCACGATGGTCGACACGGCGGGGATCAAAAAGAAGGGCAAACTCTACGAAAATACCGAGCGTTACGCCCTAATGCGCTCAATGCGGGCGATCGATGACTCCGACGTCGTCTTAGTCGTGTTAAACGCCGAAGAGGGGATCCGGGAACTCGATAAGCACATTGCCGGCTACGCTCACGAGGCGGGACGGGCGGTGATCATCGTCGTCAATAAGTGGGACACGATCCCGGACCGGGACCAACGGACGATGACCGACTTTACCAACCTGATCCGTCACGAATTCCAGTACCTTAGTTACGCCCCGATCGTGTTTGTGTCGGCTAAGACCAAGCAACGGCTGTCCCGTTTACCGGAGATGATTGAAGAGGCCTACGATCACCAAAACCGGCGGATTCAATCGGCGGTCTTAAACGACGTCTTGATGGATGCCCTGGCCGCTAACCCAACCCCATCGTCCAACGGCCGGCGCCTGCGGGTTTACTACGCAACTCAGGTTGCCGTGGCGCCGCCGACCTTCGTGATCTTCGTTAACGATCCGGACCTGATGCACTTTTCATATGCCCGCTACTTAGAGAATCGGATCCGGGCGGCCTTTGACTTTACCGGGACCCCAATTCGCTTAATCAAACGCCGGCGCAAGTAG
Protein sequence:
MANPVVAIVGRPNVGKSTLFNRIAGERIAIVEDTPGVTRDRLYAHGEWLGKNFSMIDTGGIEMSDQPLLTQIRQQAEIAIEEADVIIMVVNVENGVTDADEQVAQILYRSNKPVVLAVNKVDNPERRLDVYDFYQLGLGEPYPVSSVHGVGLGDMLDAVIENFAEKDAEEEDDRIRFSFIGRPNVGKSSLVNAILGENRVIVSDMAGTTRDAINTQFTAKDGREFTMVDTAGIKKKGKLYENTERYALMRSMRAIDDSDVVLVVLNAEEGIRELDKHIAGYAHEAGRAVIIVVNKWDTIPDRDQRTMTDFTNLIRHEFQYLSYAPIVFVSAKTKQRLSRLPEMIEEAYDHQNRRIQSAVLNDVLMDALAANPTPSSNGRRLRVYYATQVAVAPPTFVIFVNDPDLMHFSYARYLENRIRAAFDFTGTPIRLIKRRRK
GenBank Info
locus_tag - FAM19471-i1-1.1_000791
inference - COORDINATES: similar to AA sequence:RefSeq:WP_007123051.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ribosome biogenesis GTPase Der
protein_id - extdb:FAM19471-i1-1.1_000791
Gene Locus
Located on scaffold FAM19471-i1-1_scf11
FAM19471-i1-1.1_000790
