locus tag:
FAM19471-i1-1.1_000792
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Code
|
rpsA |
|
|
|
Ortholog
|
N0.HOG0001214 |
30S ribosomal protein S1 |
|
|
KEGG gene
|
K02945 |
RP-S1, rpsA; small subunit ribosomal protein S1 |
kornec03010 |
|
Eggnog Protein
|
EP:rpsA |
|
|
|
Eggnog Ortholog
|
EO:COG0539 |
|
|
|
Eggnog Description
|
ED:Ribosomal protein S1 |
|
|
|
Gene Product
|
30S ribosomal protein S1 |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec03010
|
Ribosome |
Sequences
Nucleotide sequence (GC-content: 49.5 %):
ATGGCTGAAAACGAAAACAATAACGCTATGTTAGAAGCACTTGACTCCATCAAGACGGTAAACGTCGGTGATGTTGTTAAGGGGAGGGTATTACAAATCGACGACGACCGCCAAGCGATCGTTGGGATCGAAGACTCTGGTGTGGAAGGGGTTGTCCCAGCCAACCAACTGTCTACCAAGCCCGTTGACAACATCAATGATGTTGTCAAGGTTGGTGACGAACTTGACCTGGTTGTTATCTCCAAGATCGGGAGCGACAAGGAAAATGGTTCTTACCTGCTTTCTCATCGGCGCTTAGAAGCCATGAAGGTTTGGAACGAAATCCAAAAGAAGTTTGACGATGGCGAAACCATCACCGCTACGGTTACGCAAGCCGTTAAGGGTGGATTGGTTGTTGACGCCGGCGTCCGTGGGTTCGTTCCGGCCTCAATGATTACTGACCACTACGTTGAAGATCTGAACCAATTCAAGGGCGAAGAACTTGAATTCAAGATCATTGAAATCGAACCAAGTGAAAACCGCCTGATCCTTTCCCACAAGGAAATCGTTCAAGCACAACACGAAGAAGCTGCCAAGAAGATCTTCTCTGAATTGGCTGCTGGTGACGTGGTTGAAGGTAAGGTTGCCCGGATGACTAACTTCGGGGCCTTCATCGACCTTGGCGGTGTTGACGGGTTAGTTCACGTTTCCGAAATTTCTTACGACCACGTTGACAAGCCAGCCGACGTTCTGGAAGTTGGTCAAGAAGTTAAGGTGAAGGTCTTAAACGTTGACCCAGAACGCGAACGGATTTCCCTTTCGATCAAGCAAACCTTGCCTGGCCCATGGGATGACATCGAAGAAAAGGCTGCCGTTGGTACTGTCCTGACTGGGACGGTTAAGCGTCTGACTAGCTTTGGTGCCTTTGTGGAAGTCTTCCCTGGCGTTGAAGGTTTGGTACACATTTCCCAAATCTCCCACAAGCACATTGCTACGCCAGCTGACGTGCTTGAAGCAGGGCAAGAAGTTAAGGTGAAGGTCTTAAACGTTGACCCTGAACGTCAACGTTTGGGTCTGTCCATCAAGGCGCTTGAAGAAGCTCCGGCGGGCAGTGACAACAACAATAACAACAACGGTGGTTCCCGTCGTCCGCGTCGTCGTAACAACAACTACATCGCAGACGCACCGGAAGAAGAAAGTGGTTTCAACTTGGGTGACCTGCTTGGTGACCAATTGAAGAACTTCGACAAGTAA
Protein sequence:
MAENENNNAMLEALDSIKTVNVGDVVKGRVLQIDDDRQAIVGIEDSGVEGVVPANQLSTKPVDNINDVVKVGDELDLVVISKIGSDKENGSYLLSHRRLEAMKVWNEIQKKFDDGETITATVTQAVKGGLVVDAGVRGFVPASMITDHYVEDLNQFKGEELEFKIIEIEPSENRLILSHKEIVQAQHEEAAKKIFSELAAGDVVEGKVARMTNFGAFIDLGGVDGLVHVSEISYDHVDKPADVLEVGQEVKVKVLNVDPERERISLSIKQTLPGPWDDIEEKAAVGTVLTGTVKRLTSFGAFVEVFPGVEGLVHISQISHKHIATPADVLEAGQEVKVKVLNVDPERQRLGLSIKALEEAPAGSDNNNNNNGGSRRPRRRNNNYIADAPEEESGFNLGDLLGDQLKNFDK
GenBank Info
gene - rpsA
locus_tag - FAM19471-i1-1.1_000792
inference - COORDINATES: similar to AA sequence:RefSeq:WP_007121625.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 30S ribosomal protein S1
protein_id - extdb:FAM19471-i1-1.1_000792
Gene Locus
Located on scaffold FAM19471-i1-1_scf11
FAM19471-i1-1.1_000791
