update range to 10000 bp
locus tag: FAM19471-i1-1.1_000817 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R04365 Succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Succinyl-CoA + 2,3,4,5-Tetrahydrodipicolinate + H2O <=> CoA + N-Succinyl-2-L-amino-6-oxoheptanedioate kornec00300kornec01100kornec01120kornec01230
KEGG reaction
 R04364 Acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase; 2,3,4,5-Tetrahydrodipicolinate + Acetyl-CoA + H2O <=> N-Acetyl-L-2-amino-6-oxopimelate + CoA kornec00261kornec00300kornec01100kornec01110kornec01230
Ortholog
 N0.HOG0003620 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
KEGG gene
 K05822 dapH, dapD; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89] kornec00300kornec01100kornec01110kornec01230
KEGG gene
 K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] kornec00300kornec01100kornec01120kornec01230
Eggnog Protein
 EP:dapH
Eggnog Ortholog
 EO:COG2171
Eggnog Description
 ED:Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate
EC Number
 EC:2.3.1.89 tetrahydrodipicolinate N-acetyltransferase; tetrahydrodipicolinate acetylase; tetrahydrodipicolinate:acetyl-CoA acetyltransferase; acetyl-CoA:L-2,3,4,5-tetrahydrodipicolinate N2-acetyltransferase; acetyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 2-N-acetyltransferase kornec00300kornec01100kornec01110
EC Number
 EC:2.3.1.117 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; tetrahydropicolinate succinylase; tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate succinyltransferase; succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase; succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase kornec00300kornec01100kornec01120
Gene Code
 dapD
Gene Product
 2-3-4-5-tetrahydropyridine-2-6-dicarboxylate N-acetyltransferase

Occurs in the following pathway maps:

Pathway Description
kornec00261 Monobactam biosynthesis
kornec00300 Lysine biosynthesis
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites
kornec01120 Microbial metabolism in diverse environments
kornec01230 Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 59.7 %):

ATGGCACAATTAGACGCGCAAGCAATCATTAACTACATCGGTACCGCGCCCAAGAAGACCCCCGTTAAGGTCTACGTTAAGGGGACTGACTTAAAAGCACTTACGTTTCCCGCTGAAGTAGAGGCCTTCGTGGAACAAACTACCGGGGTCCTGTTTGGCGACTGGCAGGTCTTAAAGCCCTTCTTAGCCGAGCACGAAGCGGACTTTGCGGCGGTCCGGGTGGAAAATGCGGCCCGTAATTCCGCCGTACCGTTGCTGGACCTAAAGGAAGTTAACGCCCGGATTGAACCGGGGGCCACGATTCGCGACCAGGTTTTAATTGGCGATAACGCGGTCATCATGATGGGCGCCGTCATCAACATCGGGGCCGAAATCGGGGAGGGAACCATGATCGACATGGGGGCAATCCTCGGTGGCCGCGCCCTGGTCGGTAAGCACTGCCACATCGGTGCCGGAACCGTTTTGGCGGGGGTGGTTGAACCGGCGTCGGCCGAACCAGTCCGGATTGATGACGACGTGCTGATCGGGGCCAACGCGGTCGTGATCGAAGGAGTTCACGTCGGGGAAGGGGCCGTGGTGGCCGCCGGGGCGGTCGTGACCCAAGACGTAGCGCCGCACACGGTGGTGGCCGGGGTGCCCGCCCGCTACATTAAGGACGTTGACGAACAGACCGATTCCAAGACCGGGCTGGAAGACGATTTGAGGAAGCTCTAA

Protein sequence:

MAQLDAQAIINYIGTAPKKTPVKVYVKGTDLKALTFPAEVEAFVEQTTGVLFGDWQVLKPFLAEHEADFAAVRVENAARNSAVPLLDLKEVNARIEPGATIRDQVLIGDNAVIMMGAVINIGAEIGEGTMIDMGAILGGRALVGKHCHIGAGTVLAGVVEPASAEPVRIDDDVLIGANAVVIEGVHVGEGAVVAAGAVVTQDVAPHTVVAGVPARYIKDVDEQTDSKTGLEDDLRKL

GenBank Info

gene - dapD
locus_tag - FAM19471-i1-1.1_000817
inference - COORDINATES: similar to AA sequence:RefSeq:WP_009557853.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase
protein_id - extdb:FAM19471-i1-1.1_000817

Gene Locus

Located on scaffold FAM19471-i1-1_scf11

FAM19471-i1-1.1_000816
FAM19471-i1-1.1_000818