update range to 10000 bp
locus tag: FAM19471-i1-1.1_000850 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R10949 Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate
KEGG reaction
 R10948 ATP:HCO3- phosphotransferase; ATP + HCO3- <=> ADP + Carboxyphosphate
KEGG reaction
 R01395 ATP:carbamate phosphotransferase; ATP + Carbamate <=> ADP + Carbamoyl phosphate kornec00910kornec01100
KEGG reaction
 R00575 HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating); 2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate kornec00240kornec00250kornec01100kornec01240
KEGG reaction
 R00256 L-glutamine amidohydrolase; L-Glutamine + H2O <=> L-Glutamate + Ammonia kornec00220kornec00250kornec00471kornec01100
Ortholog
 N0.HOG0000894 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
KEGG gene
 K01956 carA, CPA1; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] kornec00240kornec00250kornec01100kornec01240
Eggnog Protein
 EP:carA
Eggnog Ortholog
 EO:COG0505
Eggnog Description
 ED:Carbamoyl-phosphate synthetase glutamine chain
EC Number
 EC:6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing); carbamoyl-phosphate synthetase (glutamine-hydrolysing); carbamyl phosphate synthetase (glutamine); carbamoylphosphate synthetase II; glutamine-dependent carbamyl phosphate synthetase; carbamoyl phosphate synthetase; CPS; carbon-dioxide:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating); carA (gene name); carB (gene name); CAD (gene name); hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) kornec00240kornec00250kornec01100
Gene Product
 carbamoyl phosphate synthase small subunit

Occurs in the following pathway maps:

Pathway Description
kornec00220 Arginine biosynthesis
kornec00240 Pyrimidine metabolism
kornec00250 Alanine, aspartate and glutamate metabolism
kornec00471 D-Glutamine and D-glutamate metabolism
kornec00910 Nitrogen metabolism
kornec01100 Metabolic pathways
kornec01240 Biosynthesis of cofactors

Sequences

Nucleotide sequence (GC-content: 55.7 %):

ATGAATAAATACCTCATCTTAGAGGACGGGACCACCTACCCGGGGACCGCCTTTGGGGACCTGGGGGCGCAAGTGGCCGGAGAGTTGGTGTTTAACACCGCCATGACTGGCTACCAAGCATCCCTGACCGATCCATCCTACTTAAACCAACTACTAACCTTTACTAACCCCCTAATCGGTACTTACGGTATTTGGCCCGGCCAAAGTCAAAGCAAGCAAGTGACCGCTGGTGCCGTGATCGTCCGTCAGCTCGAAAACGAACCGGGACCGACTGGCCAGACCTTGGATGCTTGGTTAGTCGACCATCACGTGCCGGGAATTGAGGGTGTTGACACCCGGGCGATTGCCATGCACTTACGCGAAGACGGCACCATTAAGACCCTGCTAGTTAATCAGCTGGTGACCCCAACTGAGTTTACGAACTTATATAGCCGGTTGGTCGGCCAGCAGAAACTTCCCGCTCGAAACGCTGGTGCTACGGACCCAACCGCCAACCTGACCGTTGCCCTGATCGATCTTGGGGTGAAGCAGGGGATTATTGATAATTTAGTGGACTGTGGGTGTCGAGTCGTCGTCTTACCACCATCGGCGGCGGTCGCCGAGGTCCATGAGCTCAACCCGGCCGGGGTCTTGATTTCAAACGGTCCCGGCGATCCGCTGGACTACCAGGCGGTCTTACCCCTAATTCGAGGTTTGGAACACGACTACCCGCTGGCGGGAATCTGTTTGGGACACCAATTGTTAGCCCTAGCTAATGGTGCAACCACTTATCGGCTGCCTTTTGGCCACCGGGGGGCTAATCACCCGGTGACGCTGTTGGCCTCACAGCAAACGATCATGACCAGTCAAAACCATGGCTATGCCGTTGATCCCACCAGCCTCAAGAAGACCGGCTTAAAGGTAACTGCCGTTGAGGGCAACGACCACACGGTAGAGGGGCTAACCTTGGTTGGCTACCCGGTCATTTCGGTCCAGTTTCACCCAGAGGCCGGACCGGGCCCAAACGACGCCCGGAACTTTTTCAGTCACTTTAAACAGTTAATGGAAACGGGGGTGGCGGTCAATGCCTAA

Protein sequence:

MNKYLILEDGTTYPGTAFGDLGAQVAGELVFNTAMTGYQASLTDPSYLNQLLTFTNPLIGTYGIWPGQSQSKQVTAGAVIVRQLENEPGPTGQTLDAWLVDHHVPGIEGVDTRAIAMHLREDGTIKTLLVNQLVTPTEFTNLYSRLVGQQKLPARNAGATDPTANLTVALIDLGVKQGIIDNLVDCGCRVVVLPPSAAVAEVHELNPAGVLISNGPGDPLDYQAVLPLIRGLEHDYPLAGICLGHQLLALANGATTYRLPFGHRGANHPVTLLASQQTIMTSQNHGYAVDPTSLKKTGLKVTAVEGNDHTVEGLTLVGYPVISVQFHPEAGPGPNDARNFFSHFKQLMETGVAVNA

GenBank Info

locus_tag - FAM19471-i1-1.1_000850
inference - COORDINATES: similar to AA sequence:RefSeq:WP_014562311.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - carbamoyl phosphate synthase small subunit
protein_id - extdb:FAM19471-i1-1.1_000850

Gene Locus

Located on scaffold FAM19471-i1-1_scf12

FAM19471-i1-1.1_000849
FAM19471-i1-1.1_000851