locus tag:
FAM19471-i1-1.1_000851
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
KEGG reaction
|
R10949 |
Ammonia + Carboxyphosphate <=> Carbamate + Orthophosphate |
|
|
KEGG reaction
|
R10948 |
ATP:HCO3- phosphotransferase; ATP + HCO3- <=> ADP + Carboxyphosphate |
|
|
KEGG reaction
|
R01395 |
ATP:carbamate phosphotransferase; ATP + Carbamate <=> ADP + Carbamoyl phosphate |
kornec00910kornec01100 |
|
KEGG reaction
|
R00575 |
HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating); 2 ATP + L-Glutamine + HCO3- + H2O <=> 2 ADP + Orthophosphate + L-Glutamate + Carbamoyl phosphate |
kornec00240kornec00250kornec01100kornec01240 |
|
KEGG reaction
|
R00256 |
L-glutamine amidohydrolase; L-Glutamine + H2O <=> L-Glutamate + Ammonia |
kornec00220kornec00250kornec00471kornec01100 |
|
Ortholog
|
N0.HOG0000876 |
carbamoyl-phosphate synthase large subunit |
|
|
KEGG gene
|
K01955 |
carB, CPA2; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] |
kornec00240kornec00250kornec01100kornec01240 |
|
Eggnog Protein
|
EP:carB |
|
|
|
Eggnog Ortholog
|
EO:COG0458 |
|
|
|
Eggnog Description
|
ED:Carbamoyl-phosphate synthase |
|
|
|
EC Number
|
EC:6.3.5.5 |
carbamoyl-phosphate synthase (glutamine-hydrolysing); carbamoyl-phosphate synthetase (glutamine-hydrolysing); carbamyl phosphate synthetase (glutamine); carbamoylphosphate synthetase II; glutamine-dependent carbamyl phosphate synthetase; carbamoyl phosphate synthetase; CPS; carbon-dioxide:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating); carA (gene name); carB (gene name); CAD (gene name); hydrogen-carbonate:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating) |
kornec00240kornec00250kornec01100 |
|
Gene Product
|
carbamoyl-phosphate synthase large subunit |
|
|
|
Gene Code
|
carB |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec00220
|
Arginine biosynthesis |
|
kornec00240
|
Pyrimidine metabolism |
|
kornec00250
|
Alanine, aspartate and glutamate metabolism |
|
kornec00471
|
D-Glutamine and D-glutamate metabolism |
|
kornec00910
|
Nitrogen metabolism |
|
kornec01100
|
Metabolic pathways |
|
kornec01240
|
Biosynthesis of cofactors |
Sequences
Nucleotide sequence (GC-content: 53.5 %):
ATGCCTAAGAGAACGGATTTACACAAGATCTTAGTGATCGGGTCGGGACCAATTGTGATCGGTCAAGCCGCTGAGTTTGATTACGCTGGCAGCCAGGCCTGCATCAGCCTTAAGGAAGAGGGTTATCAGGTGGTCTTGGTCAATTCCAATCCAGCTACGATCATGACGGACGATCAAATTGCTGACCAAGTCTACTTGGAGCCACTGACGGTACCGTCATTAACCGAGATTATTGAACTGGAGCACCCCGACGCCCTCTTGCCAACCCTGGGCGGGCAAACCGGTCTGAACCTGGCCATCGAGCTCGACCAAGCCGGCGTCTTAAATAAGTTCGGCGTCACTCTTTTAGGCACCGATTTACAAACGATCCAGGAGGCCGAAGACCGAGAGCAATTTAAGCAGTTAATGGAGGAGATTGGGCAACCGGTACCGGCGAGCCTAACCGTTCACACTGTCGAGGCAGCTTGTCAGTTTGCCGAAGAAGCGGGCTACCCAGTAATCGTTCGACCGGCCTTCACTCTTGGGGGAACCGGAGGCGGGATCGCCAACGACCAGGAAGAGCTTGAGCTGATTGCTAAACGGGGGCTAGCTCAGTCGCCGGTCACGGAATGCCTGATTGAGCAAAGTATCGCCGGCTTAAAGGAAATTGAGTTTGAAGTAATGCGCGATGCCAACGGGGACGAGATAAGTGTTTGTTGCATGGAAAATTTCGACCCGGTCGGTATTCACACTGGTGATTCAATCGTAGTGGCGCCCAACCAAACCCTGCCGGATGTTCAGTACCAACGGCTTCGGTCAGCAGCCCTAGCGATCGTAGCCGCCCTAAAGATTGAAGGGGGCTGCAACGTTCAACTGGCCCAGTCACCGATTAGTGATGATTATTACGTGATTGAGGTTAACCCGCGGGTTAGCCGTTCGTCGGCCCTCGCCTCCAAAGCGACTGGCTACCCGATCGCCAAGATTGCCGCTAAGATCGCCGTTGGCCTTAACTTGAGTGAAATCACCAATCCGGTTACCCAGACCACAATCGCTGCCTTCGAGCCAGCCCTCGACTACGTAGTTGTTAAGTTACCGCGCTTCCCCTTTGACAAATTCGGTGGAGCCGATCGCCACTTAGGGACTCAAATGAAGGCAACCGGGGAGGTGATGGGCATCGGTCTAACCTTTGAAGAGGCGCTCTTAAAGGCAATTGACTCGCTGGAAATTGACCCTGGGGTTCAGGCGAGCCTCCTGCCGGCTAACGATGATCAGCTAAGCGACCAGGAATTGGTGGCAGCTCTTAAATCACCAACTGACCTGCGACTGTTTGAGCTCTTCGTCGCCCTTAAACGGGGCTATTCAACCGCTGACTTAGCGGAATGGACCAAGATCAGCCCCTTCTTCTTGCACAAGCTGGCCCACATTTGGCAACTAAAGCGGGAATTAGTATCGCAGGGGGGAGAGGTAGTGGTTAGTGCCAAGCGGTTTGGCTTTACCAACGCCATGCTCGCCAGTGCGCTCCGATGTTCGTTGTCGACCGTTGAGCAGCTAGCTAAAAGTGCGGGGTTAGCCCCGGTTTACAAGACCGTTGATACCTGTGCCGGGGAGTTTGCTAGTGCGACCCCGTACTATTACAGCAGTTATTTCCCGGGCAATAACGAGAGTCAGCCACTGGGTAATAGTGTGTTAGTGCTTGGTTCTGGTCCAATTCGGATTGGTCAGGGGGTCGAATTTGATTACACGACCGTCCACTGCGTTCAAGCGATTCAAGAGGCCGGCTACCGTGCGATCATTATCAATAACAATCCCGAAACGGTTTCGACCGATTTTTCAATTTCCGACAAACTCTACTTTGAACCGCTGACGATTGAGCACGTCATGAACGTGGTCAACCTAGAGCAGCCACGCGGGGTGATCGTTCAGTTTGGGGGTCAAACGGCCATTAACCTGACCAAGGAACTGGTTAAACGGGGGGTTAAAATTCTGGGCACCTCACTCCAGGGGATTGAACAGACCGAGGACCGCCACCAGTTTGAGAAATTACTCAAGGACGCTGAAATCGCCCAACCAAAGGGGGCCACGGCGCTCAATTTAGCCGAGGCCAAGGTGATTGCACCGGTGGTTGGCTATCCGGTAATGGTGCGGCCAAGCTTCGTGCTGGGTGGTCGGGCAATGGCGGTCGTGGAAAACAAAACCGAATTGGTAACCTACGTCAACAAGGCCCTGAAGGCGGCCCCCAACCAACCGGTTCTGATTGATCACTACGTAGCTGGGCTTGAGTGCGAAGTCGACATCTTAAGCGACGGTCACGACGTTTTGATCCCCGGGATCATGGAGCATTTGGAGGGGTCCGGGATTCACTCGGGTGATTCGATGGCCCTGTACCCACCAGTTCGCCTGACGTCAGCCCAGCAAAAAGAAATTGTTCAAACTGCGATTGCAATTGGTCAACGGGTCCACTGTCTGGGAATGATGAACATTCAATTCATCGTTGCCGACCGGGTCTATGTGATTGAAGTCAACCCGCGGGCCAGCCGGACGGTACCGTTTATGAGTAAGGTAACTGGGTATCACTTAGCCAAGCTAGCTACCCGGCTAATCCTGGGTGAAACCTTGGTCGACTTAGGTTTACCAAGTGGTTTAGCAACCCCAAGTAACCACTTCGCTGTCAAAGCGCCGGTCTTTTCCTTTGCTAAGTTGGCCGGACTTACTTGCCGGTTGGCGCCGGAAATGAAGTCAACTGGGGAAACAATTGGAATTGGTGAAAGCCCGGCCGTAGCTCTGGCCAAGGCGCTTGCTAATAGTTATGGCTTAGTAACGCCGGTGAAGGGTCAAATCGTCTTACTTGACCCAGTTGCCGCTACTGACTCTAAATTACGGGCTCAACTTGAACAAGCGGGGCTCCGGGTCGAGGTCTGGGCAAGCCAGCAATTGCCAACGCTGGAACACCAACGGGTCTGGGCAGTGGTTAATGATGACGAAGCGCAAACCACGATAGCACCATTGAACTACTACGCCCTGAGTAACGGGGTGCCCCTCTTTACGGCGGCCACCAGCCTTAGTGAAATCATGTCGTTAAGCAGGGTGGGGGCGCCGCTGGTTAATTTATAA
Protein sequence:
MPKRTDLHKILVIGSGPIVIGQAAEFDYAGSQACISLKEEGYQVVLVNSNPATIMTDDQIADQVYLEPLTVPSLTEIIELEHPDALLPTLGGQTGLNLAIELDQAGVLNKFGVTLLGTDLQTIQEAEDREQFKQLMEEIGQPVPASLTVHTVEAACQFAEEAGYPVIVRPAFTLGGTGGGIANDQEELELIAKRGLAQSPVTECLIEQSIAGLKEIEFEVMRDANGDEISVCCMENFDPVGIHTGDSIVVAPNQTLPDVQYQRLRSAALAIVAALKIEGGCNVQLAQSPISDDYYVIEVNPRVSRSSALASKATGYPIAKIAAKIAVGLNLSEITNPVTQTTIAAFEPALDYVVVKLPRFPFDKFGGADRHLGTQMKATGEVMGIGLTFEEALLKAIDSLEIDPGVQASLLPANDDQLSDQELVAALKSPTDLRLFELFVALKRGYSTADLAEWTKISPFFLHKLAHIWQLKRELVSQGGEVVVSAKRFGFTNAMLASALRCSLSTVEQLAKSAGLAPVYKTVDTCAGEFASATPYYYSSYFPGNNESQPLGNSVLVLGSGPIRIGQGVEFDYTTVHCVQAIQEAGYRAIIINNNPETVSTDFSISDKLYFEPLTIEHVMNVVNLEQPRGVIVQFGGQTAINLTKELVKRGVKILGTSLQGIEQTEDRHQFEKLLKDAEIAQPKGATALNLAEAKVIAPVVGYPVMVRPSFVLGGRAMAVVENKTELVTYVNKALKAAPNQPVLIDHYVAGLECEVDILSDGHDVLIPGIMEHLEGSGIHSGDSMALYPPVRLTSAQQKEIVQTAIAIGQRVHCLGMMNIQFIVADRVYVIEVNPRASRTVPFMSKVTGYHLAKLATRLILGETLVDLGLPSGLATPSNHFAVKAPVFSFAKLAGLTCRLAPEMKSTGETIGIGESPAVALAKALANSYGLVTPVKGQIVLLDPVAATDSKLRAQLEQAGLRVEVWASQQLPTLEHQRVWAVVNDDEAQTTIAPLNYYALSNGVPLFTAATSLSEIMSLSRVGAPLVNL
GenBank Info
gene - carB
locus_tag - FAM19471-i1-1.1_000851
EC_number - 6.3.5.5
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391100.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - carbamoyl-phosphate synthase large subunit
protein_id - extdb:FAM19471-i1-1.1_000851
Gene Locus
Located on scaffold FAM19471-i1-1_scf12
FAM19471-i1-1.1_000850
