OpenGenomeBrowser
Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_000856
locus tag:
FAM19471-i1-1.1_000856
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Product
translation initiation factor IF-2
Ortholog
N0.HOG0001201 translation initiation factor IF-2
KEGG gene
K02519 infB, MTIF2; translation initiation factor IF-2
Gene Code
infB
Gene Ontology
GO:0044464 obsolete cell part
Gene Ontology
GO:0044424 obsolete intracellular part
Gene Ontology
GO:0005737 cytoplasm
Gene Ontology
GO:0005623 obsolete cell
Gene Ontology
GO:0005622 intracellular anatomical structure
Gene Ontology
GO:0005575 cellular_component
Eggnog Protein
EP:infB
Eggnog Ortholog
EO:COG0532
Eggnog Description
ED:One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
Sequences
Nucleotide sequence (GC-content: 56.0 %):
A T G G C C A A A G A A A G A A T C T A C G A A T T A G C T A A A G A G C T C A A A A T G C C A A G C A A G G A C C T G G T T A A C T T A G C C A A A A A G G A G G G G A T G G A C G T T A A G A C C C A C A T G T C T T C C G T C A C T T C C G A C G A A G C C A A C A A G C T G C G T T C A A T G G C C A A G G G G G C G G G T A A G C C A G C T A C T G T T A A G C C G G C A C C A A A G G T C C A A G A A C A C C A G T C G G C C C C G G C G A A G A A G G A A G C C A G C C G T C C G G C C A A C C A A G G C A G C C A A A A C A A C C A G A A C C G C G A C A A C C G G G G G A A C C G G A A C A A C A A C G G C A A C A A T A A C C G C C A C A A C A G C A A T A A C G G T T C C G C T A A T G C T A A C G G T A A C G G C G G C A A C C A A A A G C G G A A C C A A A A C A A C A A C A A C A A C A A C C A G G G T G G C C A A G C C G C T A A C C G G A A C A A T A A C A A C G G T C A A G G T C A G G G T G C A C A C T G G T T T A A A A A G G G T A A G A A G A A C A A C A A G A A G A A G A A C C G T A A C A A G G G T A A C C A A C G C C T G C G C G A C A C G G C T C C T A A G G C C C C A A C C C A A C G C A A G G A T C G G C C G C T G C C G G A C G T A T T G G A A T A C A C G A A C G G C A T G A A C G C C C A G G A C C T C G G G A A G A T C T T G C A C C G G T C A C C A G C C G A A A T C A T C A A G A A G C T C T T C A T G T T A G G G G T G A T G G T G A A C C A A A A C C A A T C C C T G G A T G C G G A C A C G A T T G A A A T T T T G G C G G C C G A C T A C G G G A T C G G A G C C A A G G A A A A G G T C C A A G T C G A C G T G G C C G A C T T A G A C C A C T T C T T T G A C G A A C G G A T C A A C A A C G A C G C C A A C C T C G C C G A C C G G C C A C C G G T T G T G A C G G T C A T G G G G C A C G T T G A C C A C G G G A A G A C G A C C T T G C T A G A C A A G A T T C G T C A C T C C C A C G T G A C C G A A G G C G A A G C C G G C G G G A T C A C C C A A G C C A T T G G G G C C T A C C A A G T T A A G T A C A A C G A C A A G T T G A T C A C C T T C T T G G A C A C C C C A G G G C A C G C C G C C T T T A C C G A A A T G C G G G C G C G T G G G G C C A A C A T C A C C G A C A T C A C C G T T C T A G T G G T G G C C G C C G A T G A C G G G G T G A T G C C A C A A A C G A T C G A A G C C A T T A A C C A C G C C A A G G C A G C C G G C A C G C C G A T C A T C G T C G T C G T G A A C A A G A T C G A C A A G C C G G G C G C T A A C C C G G A C C A C G T C A C G G A A C A A C T G A C C G A A T A C G G C C T G A T C C C A G A A G A C T G G G G T G G G G A C A C G A T T T A C G T C A A G G T T T C C G C C A A G T T C G G C A A G A A C A T C G A C G A A T T G C T C G A C A T G A T C T T G C T G C A A G C C G A A G T G A T G G A A T T A A A G G C G A A C C C A G A C C A A A A C G C C G C T G G G G C A G T G G T G G A A G C C C G C C T C G A C C A G G G G A A G G G G T C C G T A G C C A C C C T C T T G G T T C A A C A A G G G A C C C T G C A C G T A G G G G A C C C A A T C G T G G T C G G C G A C A C C T T T G G T C G G G T C C G G A C G A T G A C C A A C G A A A A C G G C C G G C G G A T C A A G G A C G C C A C C C C A T C G A C G C C A G T C G A A A T T A C C G G G C T C A A C G G G G T G C C G G A A G C C G G G G A C C A C T T T G T T G T C T T T G A C G A C G A A A A G A C G G C C C G G G C C G C C G G G G A A G A A C G G G C T A A G C G G G C C G A A G A T G A A A A G C G G C G C C G C A C T A G T C A C G T G A C C C T G G A C A A C C T C T T T G A C A C G A T G A A G A A G G G T G A A A T G A A G T C C C T G C C G A T C A T C A T C A A G G C C G A C G T G C A A G G G T C C G T T G A G G C C C T C G C C C A A A G C C T G C A A A A G A T C C A G G T T G A C G G C G T G C G G G T C G A C A T C A T C C A C A A G G C C G T T G G G G C G A T C T C T G A A T C A G A C G T T A C C C T G G C C G A A G C T T C C A A C G C C A T C A T C A T C G G C T T T A A C G T T C G C C C A A C T C C G C T G G C G A A G T C C G A A G C C G A A A C T A A C A A C A T C G A C A T C C G C T T A C A C C G G G T G A T C T A C A A C G C G A T C G A A G A A G T T G A A G A C G C C A T G A A G G G G A T G C T G G A A C C A G T T T A C G A A G A A G A A G T G C T G G G T C A A G T T G A A G T G C G G C A A C T T T A C A A G G C G T C C A A G A T C G G G A C G A T T G C C G G G G G G A T G G T T G T C T C C G G T A A G A T C A C C C G C G A C G C C A A G G T C C G C C T G A T C C G T G A T G G C G T G G T C A T T T A C G A A G G C G A A T T G G G C T C A C T C A A G C G C T T C A A G G A C G A C G C T A A G G A A G T T A A G A T G G G C T T T G A A T G T G G G T T G A C G A T C A A G A A C T T C A A T G A C G T C A A G G A A A A C G A C G T C A T C G A A G C T T A C C A C A T G A A A G A A G T T C C G G T T A A G T A A
Protein sequence:
M A K E R I Y E L A K E L K M P S K D L V N L A K K E G M D V K T H M S S V T S D E A N K L R S M A K G A G K P A T V K P A P K V Q E H Q S A P A K K E A S R P A N Q G S Q N N Q N R D N R G N R N N N G N N N R H N S N N G S A N A N G N G G N Q K R N Q N N N N N N Q G G Q A A N R N N N N G Q G Q G A H W F K K G K K N N K K K N R N K G N Q R L R D T A P K A P T Q R K D R P L P D V L E Y T N G M N A Q D L G K I L H R S P A E I I K K L F M L G V M V N Q N Q S L D A D T I E I L A A D Y G I G A K E K V Q V D V A D L D H F F D E R I N N D A N L A D R P P V V T V M G H V D H G K T T L L D K I R H S H V T E G E A G G I T Q A I G A Y Q V K Y N D K L I T F L D T P G H A A F T E M R A R G A N I T D I T V L V V A A D D G V M P Q T I E A I N H A K A A G T P I I V V V N K I D K P G A N P D H V T E Q L T E Y G L I P E D W G G D T I Y V K V S A K F G K N I D E L L D M I L L Q A E V M E L K A N P D Q N A A G A V V E A R L D Q G K G S V A T L L V Q Q G T L H V G D P I V V G D T F G R V R T M T N E N G R R I K D A T P S T P V E I T G L N G V P E A G D H F V V F D D E K T A R A A G E E R A K R A E D E K R R R T S H V T L D N L F D T M K K G E M K S L P I I I K A D V Q G S V E A L A Q S L Q K I Q V D G V R V D I I H K A V G A I S E S D V T L A E A S N A I I I G F N V R P T P L A K S E A E T N N I D I R L H R V I Y N A I E E V E D A M K G M L E P V Y E E E V L G Q V E V R Q L Y K A S K I G T I A G G M V V S G K I T R D A K V R L I R D G V V I Y E G E L G S L K R F K D D A K E V K M G F E C G L T I K N F N D V K E N D V I E A Y H M K E V P V K
GenBank Info
gene - infB
Gene Locus
Located on scaffold FAM19471-i1-1_scf12
Cellular location
Responsible annotations:
SL-0229 :
GO:0005622
intracellular anatomical structure
SL-0086 :
GO:0005737
cytoplasm
FAM19471-i1-1.1_000855
