update range to 10000 bp
locus tag: FAM19471-i1-1.1_000857 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 rbfA
Ortholog
 N0.HOG0001202 30S ribosome-binding factor RbfA
KEGG gene
 K02834 rbfA; ribosome-binding factor A
Eggnog Protein
 EP:rbfA
Eggnog Ortholog
 EO:COG0858
Eggnog Description
 ED:One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
Gene Product
 30S ribosome-binding factor RbfA

Sequences

Nucleotide sequence (GC-content: 56.2 %):

ATGCCGAATAAGCAATTCCGGGTGGAACGGCTCGCGCAACAGATTCAGCGCGAAGTCGACGACATCCTCTTAAAGCGGGTCCGCGATCCCCGGGTCAACGGGGTAACGGTGACCGGCGTTGACGTAACGGGTGACCTGCAGCAAGCGACGATCTACTACACGATCCTGTCGAAGCTGGCTTCGGACGCCGAGAAAACCCAAACCGGGTTGGATAAGGCGACCGGGCTGGTGCGCAGCGAGCTGGGGAGCCGCCTGAATATTTTCAAGGCACCGGAAATTAAGTTTGTCCGCGACCCATCGATTGAATACGGGAGTCGCATTGACGAGCTTCTGAACGAGCTTCACAAAAATAACGAGCTCTAA

Protein sequence:

MPNKQFRVERLAQQIQREVDDILLKRVRDPRVNGVTVTGVDVTGDLQQATIYYTILSKLASDAEKTQTGLDKATGLVRSELGSRLNIFKAPEIKFVRDPSIEYGSRIDELLNELHKNNEL

GenBank Info

gene - rbfA
locus_tag - FAM19471-i1-1.1_000857
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003685195.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 30S ribosome-binding factor RbfA
protein_id - extdb:FAM19471-i1-1.1_000857

Gene Locus

Located on scaffold FAM19471-i1-1_scf12

FAM19471-i1-1.1_000856
FAM19471-i1-1.1_000858