FAM19471-i1-1.1_001163 - OpenGenomeBrowser

locus tag: FAM19471-i1-1.1_001163 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type	Name	Description	Pathways
KEGG reaction	R02734	N-Succinyl-LL-2,6-diaminoheptanedioate amidohydrolase; N-Succinyl-LL-2,6-diaminoheptanedioate + H2O <=> Succinate + LL-2,6-Diaminoheptanedioate	kornec00300kornec01100kornec01120kornec01230
Ortholog	N0.HOG0000888	ArgE/DapE family deacylase
KEGG gene	K01439	dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]	kornec00300kornec01100kornec01120kornec01230
Eggnog Ortholog	EO:COG0624
Eggnog Description	ED:succinyl-diaminopimelate desuccinylase
EC Number	EC:3.5.1.18	succinyl-diaminopimelate desuccinylase; N-succinyl-L-alpha,epsilon-diaminopimelic acid deacylase	kornec00300kornec01100kornec01120
Gene Product	ArgE/DapE family deacylase

Occurs in the following pathway maps:

Pathway	Description
kornec00300	Lysine biosynthesis
kornec01100	Metabolic pathways
kornec01120	Microbial metabolism in diverse environments
kornec01230	Biosynthesis of amino acids

Sequences

Nucleotide sequence (GC-content: 60.9 %):

ATGGATCAAACCGAACGGACCCGGGTGCTTAGCGACCTGGTCAAAATTAATAGTATCAACGGCAATGAACTAGAAGTGGCCAATTACTTGCGCCGCCTGTTTGAACAGCACGGGTTGACGGCCGACGTCCAGCCCTTCGGCGAGCAGCGGGCCAACCTGATTGTAGAGGTGGGCGCCGGTAAACCAATCCTGGGGATCACCGGCCACATGGACACGGTCGCCCTGGGCGATGAAAAGAAGTGGCACCACGCCCCCCTGAGCGCCACGATTGAAGGGGACCGCCTGTACGGACGAGGGGCCGCCGACATGAAGTCGGGCCTGGCCGCCCAGGTGATTGCCCTGATTGAATTGGTTGAATCAGGAACCCTGACTGGTCACGTCCGCTTCATCGCTACGGCCGGTGAGGAGTACGGGACCCCGGGTGCTAACCGCCTGGAAGAAGCGGGGGTGGCTAAGGACCTGAACGCCCTGGTGGTCGGGGAGCCCACCAGCGGGAACGTCATCTACGCCCACTCGGGAAGCTACAACTACCGGATCGTTTCAACTGGCCAGGCGGTGCACTCTTCGGAACCGGAACGTGGCCAAAACGCCCTGGAGCCCCTGGTCGACTTTGCCCTGGCCGAACGCGACCTCTTCTTTGACGTTCCGGATGACCCCTGCCTGGGGCCGCTCAAGCACTCGGTGACGATTATTCAGGGGGGCGAGCAGGTCAACACGATTCCGGATTACGCGGAGTTGCGGGGGAACATCCGCCCCACGATGCGCTTCGATAACGACCACGTTACCGCCCGTTTGCAGGCCGCCGTGGACCGTCTTAACCAGGAGGGTGCTGCCCATTTAACCCTGGAAGTACTCCACTCCTGGCGTCCGGTGGCCTCCGATCCCGACGGTGACTTTGTCAAGCGGGCCCTGCAAGCTAGCCAGGAGGCCTTTGCAAAGTACCCGGGACACGCGACCCCGGAACTCGGGGTCATCCACGGGGCGACCGACGCCTCGGTCTTTGTCAAGCACCACCACGACCTACCGGTGATTTTACTAGGGGCTGACGACTGGAACATTTCCCACCAGGTCAACGAGTACACCACCCTGTCCTCCTTTGAGGCAACGATTGAAGCATACAAGCGCTTGATCCCGGCCTTTTTCGAGTAA

Protein sequence:

MDQTERTRVLSDLVKINSINGNELEVANYLRRLFEQHGLTADVQPFGEQRANLIVEVGAGKPILGITGHMDTVALGDEKKWHHAPLSATIEGDRLYGRGAADMKSGLAAQVIALIELVESGTLTGHVRFIATAGEEYGTPGANRLEEAGVAKDLNALVVGEPTSGNVIYAHSGSYNYRIVSTGQAVHSSEPERGQNALEPLVDFALAERDLFFDVPDDPCLGPLKHSVTIIQGGEQVNTIPDYAELRGNIRPTMRFDNDHVTARLQAAVDRLNQEGAAHLTLEVLHSWRPVASDPDGDFVKRALQASQEAFAKYPGHATPELGVIHGATDASVFVKHHHDLPVILLGADDWNISHQVNEYTTLSSFEATIEAYKRLIPAFFE

GenBank Info

locus_tag - FAM19471-i1-1.1_001163
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390687.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - ArgE/DapE family deacylase
protein_id - extdb:FAM19471-i1-1.1_001163

Gene Locus

Located on scaffold FAM19471-i1-1_scf21