update range to 10000 bp
locus tag: FAM19471-i1-1.1_001174 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Gene Code
 serS
Gene Product
 serine--tRNA ligase
KEGG reaction
 R08218 L-serine:tRNASec ligase (AMP-forming); ATP + L-Serine + tRNA(Sec) <=> AMP + Diphosphate + L-Seryl-tRNA(Sec) kornec00970
KEGG reaction
 R03662 L-Serine:tRNA(Ser) ligase (AMP-forming); ATP + L-Serine + tRNA(Ser) <=> AMP + Diphosphate + L-Seryl-tRNA(Ser) kornec00970
Ortholog
 N0.HOG0001169 serine--tRNA ligase
KEGG gene
 K01875 SARS, serS; seryl-tRNA synthetase [EC:6.1.1.11] kornec00970
Eggnog Protein
 EP:serS
Eggnog Ortholog
 EO:COG0172
Eggnog Description
 ED:Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine
EC Number
 EC:6.1.1.11 serine---tRNA ligase; seryl-tRNA synthetase; SerRS; seryl-transfer ribonucleate synthetase; seryl-transfer RNA synthetase; seryl-transfer ribonucleic acid synthetase; serine translase kornec00970

Occurs in the following pathway maps:

Pathway Description
kornec00970 Aminoacyl-tRNA biosynthesis

Sequences

Nucleotide sequence (GC-content: 55.0 %):

ATGTTAGACATCAAGCAAATTCGCCAACAACCGGACTGGTTCAAAGAAAAGCTGGCCACCCGGGGCGTTCAACCAGAAGAAATCGACGCCGTGCTGGAACTGGACGCCAAGCGGCGCGAACTCCTGCAACAAACCGAAACCCTGAAGGCCAAGCGTAACGAAGCCTCCAAGAAGATCGGGGAAGCTAAGCGGGCCAAGCAATCCGCTGACGAAGCAATTGCCGAGATGCGCCAAGTCGGCGAAGACATCAAGGCCTTAGACGAACAGGTGGAAGCAAACGACAAGGACCTCTTTGACAAGTTAGCCCACTTGCCGAACGTCCCTCACGAAGGGGTGCCGGTTAGCCTAACCGAAGATGGGGCCGAAGAACTGCGTAAGGTAGGTCAAGCCCGTCAATTCGACTTTGAACCAAAGCACCACTGGGAAATCGGCGAAAACCTCGGGATTTTGGACTTTGAACGGGCCGGTAAGGTTTCCGGCTCCCGCTTCGTCTACTACGTCGGCCTCGGGGCTCAATTAGAACGGGCGCTGTACAACTTCATGCTCGATGAACACATGAAGGAAGGCTACACCGAAGTCTTGCCTCCGTACATCGTCAACGCTCACGCGATGTACGGGACCGGTCAATTCCCGAAGTTCAAGCAGGACGTTTACCAAGTGAACGGCGAAGACATGACCCTGATCCCGACCGCCGAAGTTCCGTTGACCAACTACTTTGCCGGCGAAGTGATCCCCGCAGAAAAGCTGCCGGTTTACGTGACGGCCTTGACGCCTAGCTTCCGTTCCGAAGCTGGGTCAGCTGGTCGCGATACCCGCGGGTTGATCCGGATGCACCAATTCAACAAGGTCGAAATGGTTAAGTACACCAAGCAAGATCAATCCTGGGAAGAACTCGACAAGATGACGGCCAACGCCGAAAACATCCTCCAAAAGCTCGGCCTGCCGTACCACGTCATCACCCTGACGACTTCGGACATGAGCTTCACGGCCTCCGAAACCCACGACCTGGAACTGTGGATGCCGGCCCAAAACAAGTACCGGGAAGTTTCCTCTTGCTCCAACTGCTTGGACTTCCAAGCCCGGCGCCTGCACATGCAATACCGGGACGAAAACGGTAAGCTCCAATACGTGCACACCCTGAACGGTTCTGGTTTAGCCGTTGGGCGGACGTTGGCGGCCATCTTAGAAAACTACCAAAACGAAGACGGCTCCGTGACGATTCCAGAAGTGCTGGTACCGTACTTCCACGGCATCACCAAGATCACCAAGGAAAACGCCGTGCCGTTTAACAACAAGTAA

Protein sequence:

MLDIKQIRQQPDWFKEKLATRGVQPEEIDAVLELDAKRRELLQQTETLKAKRNEASKKIGEAKRAKQSADEAIAEMRQVGEDIKALDEQVEANDKDLFDKLAHLPNVPHEGVPVSLTEDGAEELRKVGQARQFDFEPKHHWEIGENLGILDFERAGKVSGSRFVYYVGLGAQLERALYNFMLDEHMKEGYTEVLPPYIVNAHAMYGTGQFPKFKQDVYQVNGEDMTLIPTAEVPLTNYFAGEVIPAEKLPVYVTALTPSFRSEAGSAGRDTRGLIRMHQFNKVEMVKYTKQDQSWEELDKMTANAENILQKLGLPYHVITLTTSDMSFTASETHDLELWMPAQNKYREVSSCSNCLDFQARRLHMQYRDENGKLQYVHTLNGSGLAVGRTLAAILENYQNEDGSVTIPEVLVPYFHGITKITKENAVPFNNK

GenBank Info

gene - serS
locus_tag - FAM19471-i1-1.1_001174
EC_number - 6.1.1.11
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003669649.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - serine--tRNA ligase
protein_id - extdb:FAM19471-i1-1.1_001174

Gene Locus

Located on scaffold FAM19471-i1-1_scf21

FAM19471-i1-1.1_001173
FAM19471-i1-1.1_001175