update range to 10000 bp
locus tag: FAM19471-i1-1.1_001230 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R11528 L-cysteine:sulfur-acceptor sulfurtransferase; L-Cysteine + [Protein]-L-cysteine <=> L-Alanine + [Protein]-S-sulfanyl-L-cysteine
KEGG reaction
 R03599 L-selenocysteine selenide-lyase (L-alanine-forming); L-Selenocysteine + Reduced acceptor <=> Hydrogen selenide + L-Alanine + Acceptor kornec00450kornec01100
Ortholog
 N0.HOG0001474 cysteine desulfurase
KEGG gene
 K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] kornec00450kornec01100
Eggnog Protein
 EP:sufS
Eggnog Ortholog
 EO:COG0520
Eggnog Description
 ED:Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine
EC Number
 EC:4.4.1.16 selenocysteine lyase; selenocysteine reductase; selenocysteine beta-lyase kornec00450kornec01100
EC Number
 EC:2.8.1.7 cysteine desulfurase; IscS; NIFS; NifS; SufS; cysteine desulfurylase kornec00730kornec01100
Gene Product
 cysteine desulfurase

Occurs in the following pathway maps:

Pathway Description
kornec00450 Selenocompound metabolism
kornec00730 Thiamine metabolism
kornec01100 Metabolic pathways

Sequences

Nucleotide sequence (GC-content: 56.2 %):

ATGGACAAAAGTATTAGTGACCTTCGCGCCGACTTTCCGATTTTGGACCAGCGGGTTAACGATGAGCCTCTGGTGTACCTCGATAACGCCGCTACGGCCCAGCGCCCCACCCCGGTTCTTAAGCAGGTACTCGACTTTTACCAAACCGATAACGCCAACGTGCACCGCGGGGTCCACACCCTAGCGGAACGGGCAACCGCCGATTACGAAGCGGCCCGCGATAGGGTGCAGAAGTTCATTCACGCAAAGAAGCGAGAAGAAGTGATCTTTACCAAGGGGTGCACCGATTCCTTAAACCTGGTCGCCGCCACTTACGGCGAGCAAAACATCCAGGCCGGCGATGAAATTGTCATCTCAATTATGGAACACCACTCCAATTTGATTCCGTGGCAACAGCTAGCGCTTAAAAAGGGCGCCACCCTTAAGTACATCGGTTTAACGAAGGAGGGTGAATTGGATCTGGCAGATGCGGCGGCTAAGATTACCGACCGTACCAAGATCGTCGCCGTTACTCACGCTTCCAACGTGATGGGAACGGTGACGCCCTTAAAACAATTGGCCAAGTTGGCCCACCAACACGGGGCGATTATCGTCGGCGACGGGGCCCAAGCGGTTCCCCACATGAAGGTTGACGTAACCGAATTGGACGTGGACTTTTACGCTTTTTCCGGCCATAAGATGATGTCGCCCACCGGAATCGGGGTCTTGTATGGCAAACAAGCCCTGTTGGAGGCCATACCCCCTTATCAGTACGGCGGCGAAATGATTGGCACGGTAACCGAACAGGCAAGTACCTGGGCGGCCCTGCCGTACAAGTTTGAGGCCGGGACCCAAAACATCGCCGGGGCCGTTGGCTTAGGGGCGGCGATCGATTACTTGACGGCGATTGGAATGGACCAGGTTGAAGCCCACGAACGGGTGCTGGTGCAAACGGTCTTGCCTCAATTACTCGCAATTGAGGGGCTAACGGTTTACGGACCGACCGACCCGGCTAAGCACACCGGGGTGATCTCCTTTAACCTCGGCCACCTGCACCCCCACGACCTGGCGACGGCGCTAGACATGGAAGGGGTCGCCGTGCGGGCGGGTCACCACTGCGCACAACCATTGATGAATTACCTTGGTCTGGAGGCCAGCGCCCGGGCCAGCTTTTACCTGTATAACACCGCGGCTGACGCTGAGAAGTTGGTGTCAGCACTAAAGGAAGCAAAGGAGTTCTTCAGAATTGGGACTATCTAA

Protein sequence:

MDKSISDLRADFPILDQRVNDEPLVYLDNAATAQRPTPVLKQVLDFYQTDNANVHRGVHTLAERATADYEAARDRVQKFIHAKKREEVIFTKGCTDSLNLVAATYGEQNIQAGDEIVISIMEHHSNLIPWQQLALKKGATLKYIGLTKEGELDLADAAAKITDRTKIVAVTHASNVMGTVTPLKQLAKLAHQHGAIIVGDGAQAVPHMKVDVTELDVDFYAFSGHKMMSPTGIGVLYGKQALLEAIPPYQYGGEMIGTVTEQASTWAALPYKFEAGTQNIAGAVGLGAAIDYLTAIGMDQVEAHERVLVQTVLPQLLAIEGLTVYGPTDPAKHTGVISFNLGHLHPHDLATALDMEGVAVRAGHHCAQPLMNYLGLEASARASFYLYNTAADAEKLVSALKEAKEFFRIGTI

GenBank Info

locus_tag - FAM19471-i1-1.1_001230
inference - COORDINATES: similar to AA sequence:RefSeq:WP_019253385.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - cysteine desulfurase
protein_id - extdb:FAM19471-i1-1.1_001230

Gene Locus

Located on scaffold FAM19471-i1-1_scf23

FAM19471-i1-1.1_001229
FAM19471-i1-1.1_001231