locus tag:
FAM19471-i1-1.1_001247
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Ortholog
|
N0.HOG0000990 |
penicillin-binding protein |
|
|
KEGG gene
|
K05366 |
mrcA; penicillin-binding protein 1A [EC:2.4.1.129 3.4.16.4] |
kornec00550kornec01100kornec01501 |
|
Gene Ontology
|
GO:0005576 |
extracellular region |
|
|
Gene Ontology
|
GO:0005575 |
cellular_component |
|
|
Eggnog Protein
|
EP:ponA |
|
|
|
Eggnog Ortholog
|
EO:COG0744 |
|
|
|
Eggnog Description
|
ED:penicillin-binding protein 1A |
|
|
|
EC Number
|
EC:3.4.16.4 |
serine-type D-Ala-D-Ala carboxypeptidase; DD-peptidase; D-alanyl-D-alanine-carboxypeptidase; D-alanyl-D-alanine-cleaving-peptidase; D-alanyl-D-alanine-cleaving peptidase; DD-transpeptidase; D-alanine carboxypeptidase; DD-carboxypeptidase; D-alanyl carboxypeptidase |
kornec00550 |
|
EC Number
|
EC:2.4.1.129 |
peptidoglycan glycosyltransferase; PG-II; bactoprenyldiphospho-N-acetylmuramoyl-(N-acetyl-D-glucosaminyl)-pentapeptide:peptidoglycan N-acetylmuramoyl-N-acetyl-D-glucosaminyltransferase; penicillin binding protein (3 or 1B); peptidoglycan transglycosylase; undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide):undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide) disaccharidetransferase |
kornec00550 |
|
Gene Product
|
carboxypeptidase |
|
|
Occurs in the following pathway maps:
| Pathway |
Description |
|
kornec00550
|
Peptidoglycan biosynthesis |
|
kornec01100
|
Metabolic pathways |
|
kornec01501
|
beta-Lactam resistance |
Sequences
Nucleotide sequence (GC-content: 56.7 %):
ATGAATAATGAAGAAGTTTCTCGGCGAAGCCAACGCCCCCACAAGGATCGCGGCGGCCGGGGACGGGGCTCGATTCTAAAACGAATCTTCTTGTGGGCCCTTAGTCTCTTCGTCCTCGCCTTCGTGGCACTGGCGGCCCTGTTTTTCTACTACGCCTCCAGCGCCCCCACGATCACCGAAAACGACCTCAAGAGTCAAACCACCACCACGATTTACGATGCCAACAACAAGGTCATCTCGCGGTTGGGGGCCCAGAAGCGTGAATACGCCTCGAACTCGGAGATTCCAACCCTCTTAAAGCACGGGGTCGTTGCCATCGAAGACCGCCGCTTTTACCAAGGCCACGGGGTGGACCCGGTCCGGATCGTGGAAGCGGCGATCGACAACGTCTTACACCGTTCGAACGGGATGCAAGGGGGGTCCACGATTACCCAGCAGTTAGTCAAGTTGTCGGTCTTTTCGACGGCCGCTTCGGACCAAACCTTCAAGCGCAAGGCCCAAGAAGCCTGGCTGGCCATCAACGTGGAACGCCACTTCACCAAAAACCAGATCCTCGACTTTTACATCAATAAGGTCTACATGGGGAACGGGGTTTACGGGATGAAGACGGCCGCCCAGTACTACTACGGTAAGAGCCTAAAGGAATTGGACCTCTCCCAACTGGCCCTGTTAGCCGGGATTCCGCAGTCACCAACCTACTACAACCCGGCCAACACCGACACTAAGCCGGCCACCCAGCGGCGCAACGAGGTCTTGGCCGCCATGGTCCGGGCTAAGTACATTACCCAGGCCCAGGCCAACGCCGCCATGAAGGAAAGCGTCACCGACGGGCTCGATTCCACCCACGGTAACACCAGTTCCAACGATTCTAGCGTTGACGAAAGGGTGGTGGACTCCTATGTCAAGGAAGTCCTGACCCAGCTGGAAGCCAAGGGATACAACCCGAACACTGACGGCTTGCAAGTGCACACCTCCTTAGACCTGGGGGCCCAAGAAGAACTGTACAACGCCGCTAACAACACGGTTTCCTTCCAAAGCGATAAGATGCAGACCGGGGTCGCCGTCGTCAACCCGCACAACGGTCAAGTGGTCGCCATGCTTGGGGGCCGCAAGACCGGGGACGTGGTGTACGGGCTTAACCGGGCCGTGCAAACCGACCGTTCCTCCGGGTCAACGGCCAAGCCGATCATGGACTACGGGCCGGCCATCCAGTACCTGAAGTGGCCAACCTACTACGCCCTGTCCGATACCAAGTTCACCTTCCCGGGCACCAACACCGTCTTGCACGACTTTGATAACCAGTACAAGGGCACGATGACGATGCGGACCGCCCTGGTTGAATCACGGAACGTGCCGGCCGTCCGGACCCTGCAAGCCGTGGGGATTTCCCGGGCCACTAAGTTCTTAAAGGGCTTAGGGATCTCACAAAAGTCGGCCTACACCCTGGCTAACGGGATCGGCCTCTACGTCTCCCCACTGCAAATCGCCGCTTCTTACGCCGCCTTTGCCAACGGGGGAACTTACTACAAGCCGTACTACATCACTTCCATTACCACTCAGGATGGCAACACCATCAACTACAACAAGAGCGGTAAAACGGCGATGAATAAGGCGACGGCTTACATGATCACCGACATGCTCAAAGGGGTCATCAACTCTTCCGATGGTTCCGGAACGGCCGCCAAGCTCTCCGGGGTTAACCAAGCCGGTAAGACCGGGACGACCTCGGCATACTCAGCAGCCACCGGAACAACTTCCAACACCAACTCCGGGGTCATGGACTCTTGGATGGCTGGTTACACCAAGAACTACTCAATTGCGGTTTGGACTGGTTTTGACAACGCCAAGACCTCGATTTCCTCCTCGTACACCAAGGCGGCTCAGTACCTCTACCGGGACGTCATGCAGTACCTGGACGCCGAAAACCACGCCAGCGATTGGACGATGCCAAGCACGGTCGAAGCCGTTCAAGTTAACGGGGTCCGGCAGTTGGTAATCAAGGACTCCAAGTGGGCCCTGACGGTTACCTCTTCCACCTCGAGCTCTAGTTCCAACTCCTCTAGTTCAACGAGTTCCAGTTCTAGTTCTTCAAGATCGAGTTCTTCTAGTTCCTCGAGTGAAAGCTCCAGTTCCAGTTCGAGCTCCAGCTCTAGTTCGAGTTCTAGTTCCACCCCGTCTAGTTCGAGTTCCTCAAGCAACTCTGCTTCGACGCCAACTCCTGCTAGTTCCACCCCTACGACAACGCCAACGACACCAACGCAATAA
Protein sequence:
MNNEEVSRRSQRPHKDRGGRGRGSILKRIFLWALSLFVLAFVALAALFFYYASSAPTITENDLKSQTTTTIYDANNKVISRLGAQKREYASNSEIPTLLKHGVVAIEDRRFYQGHGVDPVRIVEAAIDNVLHRSNGMQGGSTITQQLVKLSVFSTAASDQTFKRKAQEAWLAINVERHFTKNQILDFYINKVYMGNGVYGMKTAAQYYYGKSLKELDLSQLALLAGIPQSPTYYNPANTDTKPATQRRNEVLAAMVRAKYITQAQANAAMKESVTDGLDSTHGNTSSNDSSVDERVVDSYVKEVLTQLEAKGYNPNTDGLQVHTSLDLGAQEELYNAANNTVSFQSDKMQTGVAVVNPHNGQVVAMLGGRKTGDVVYGLNRAVQTDRSSGSTAKPIMDYGPAIQYLKWPTYYALSDTKFTFPGTNTVLHDFDNQYKGTMTMRTALVESRNVPAVRTLQAVGISRATKFLKGLGISQKSAYTLANGIGLYVSPLQIAASYAAFANGGTYYKPYYITSITTQDGNTINYNKSGKTAMNKATAYMITDMLKGVINSSDGSGTAAKLSGVNQAGKTGTTSAYSAATGTTSNTNSGVMDSWMAGYTKNYSIAVWTGFDNAKTSISSSYTKAAQYLYRDVMQYLDAENHASDWTMPSTVEAVQVNGVRQLVIKDSKWALTVTSSTSSSSSNSSSSTSSSSSSSRSSSSSSSSESSSSSSSSSSSSSSSSTPSSSSSSSNSASTPTPASSTPTTTPTTPTQ
GenBank Info
locus_tag - FAM19471-i1-1.1_001247
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012391407.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - carboxypeptidase
protein_id - extdb:FAM19471-i1-1.1_001247
Gene Locus
Located on scaffold FAM19471-i1-1_scf24
Cellular location
Responsible annotations:
SL-0243:
GO:0005576
extracellular region
FAM19471-i1-1.1_001246
