update range to 10000 bp
locus tag: FAM19471-i1-1.1_001323 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
KEGG reaction
 R07404 5-amino-1-(5-phospho-D-ribosyl)imidazole:carbon-dioxide ligase (ADP-forming); ATP + Aminoimidazole ribotide + HCO3- <=> ADP + Orthophosphate + 5-Carboxyamino-1-(5-phospho-D-ribosyl)imidazole kornec00230kornec01100kornec01110
Gene Code
 purK
Ortholog
 N0.HOG0001359 5-(carboxyamino)imidazole ribonucleotide synthase
KEGG gene
 K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] kornec00230kornec01100kornec01110
Gene Ontology
 GO:0044464 obsolete cell part
Gene Ontology
 GO:0044444 obsolete cytoplasmic part
Gene Ontology
 GO:0044424 obsolete intracellular part
Gene Ontology
 GO:0005829 cytosol
Gene Ontology
 GO:0005737 cytoplasm
Gene Ontology
 GO:0005623 obsolete cell
Gene Ontology
 GO:0005622 intracellular anatomical structure
Gene Ontology
 GO:0005575 cellular_component
Eggnog Protein
 EP:purK
Eggnog Ortholog
 EO:COG0026
Eggnog Description
 ED:Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
EC Number
 EC:6.3.4.18 5-(carboxyamino)imidazole ribonucleotide synthase; N5-CAIR synthetase; N5-carboxyaminoimidazole ribonucleotide synthetase; PurK kornec00230kornec01100kornec01110
Gene Product
 5-(carboxyamino)imidazole ribonucleotide synthase

Occurs in the following pathway maps:

Pathway Description
kornec00230 Purine metabolism
kornec01100 Metabolic pathways
kornec01110 Biosynthesis of secondary metabolites

Sequences

Nucleotide sequence (GC-content: 59.2 %):

GTGCCGACCTTGACTAGGGCGGGCTACATTCCCCAGGGGGGGACGATCGGCATCATCGGCGGGGGCCAACTGGGCCAGATGATGGCATTGAACGCTAAGTACGCCGGCATGAAGGTGATTATCCTGGACCCGACGCCCAACTGCCCGGCCGGCCAGTGCGCCGACGACCAGATTGTGGCGCCCTACGAGGACAAACAAGCGATTGAAGAGCTGGCTAAGCGCGCCGACGTGTTGACTTACGAGTTTGAAAACGTTGACTTGGCGGCCCTAGAAGCGGTCGCCGACCAAGTCGCCATCCCGCAGGGGACCGAACTCTTGCGGATCACCAAGGACCGGATCCGGGAAAAGACCTTCTTACAAGAAGGGGGCCTCTCAACGGCGCCCTTTGCGGCGGTCACTAACCAGGCCGAATTAGAGGCGGCCGTCACCAAGATTGGCTACCCGAGCGTCTTGAAGACCTGCGAAGGGGGCTACGATGGCCACGGTCAAGTCATCCTGAAAAGCGCCGCGGACCTGGCGAAGTGCACGGATGTCTTGGCGACTGGTAACTGCATCTTAGAGGGCTGGGTTAAATTTGACCTCGAGTGTTCGGTGATGGTGGCCAGAAACGCCAACCAAGAGATCGTTACCTTCCCGGTCAGCGAAAACATCCACCAAAACGAGATCCTGCACCTGTCGATCGTGCCGGCCCGGATCAGCACCGCCCTGCAGGAACGGGCCCGGGAGATGGCTAAGCAAATCGCCGAGCAACTGGACCTCAGGGGGATCCTAGGGGTGGAGATGTTTGTCGCCCACGACGGCCACATTTACATTAACGAACTGGCCCCGCGCCCGCACAATTCGGGTCACTTTTCGCTTGAGGCCTGCGACTTCTCCCAGTTCGCCATCCACAACCGGGCGATCTGCAACTGGCCGCTACCACAGCCAACGTTATTAAAGCCCGCCGTCATGGTGAACGTCTTGGGCCAACATCAGAAGGGCGTTGCCGCTTTAATCAGCCACAAGCCCACCTGGCACTTCCACGATTACGGCAAGGCCGACAGCCGGGTTAACCGTAAGATGGGCCACGTGACCATCCTAACCAACGACTTAGACGCCACCCTAGAAGAAATTGCTGCCACCCACGTTTGGGACGCTTAA

Protein sequence:

MPTLTRAGYIPQGGTIGIIGGGQLGQMMALNAKYAGMKVIILDPTPNCPAGQCADDQIVAPYEDKQAIEELAKRADVLTYEFENVDLAALEAVADQVAIPQGTELLRITKDRIREKTFLQEGGLSTAPFAAVTNQAELEAAVTKIGYPSVLKTCEGGYDGHGQVILKSAADLAKCTDVLATGNCILEGWVKFDLECSVMVARNANQEIVTFPVSENIHQNEILHLSIVPARISTALQERAREMAKQIAEQLDLRGILGVEMFVAHDGHIYINELAPRPHNSGHFSLEACDFSQFAIHNRAICNWPLPQPTLLKPAVMVNVLGQHQKGVAALISHKPTWHFHDYGKADSRVNRKMGHVTILTNDLDATLEEIAATHVWDA

GenBank Info

gene - purK
locus_tag - FAM19471-i1-1.1_001323
EC_number - 6.3.4.18
inference - COORDINATES: similar to AA sequence:RefSeq:WP_012390745.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - 5-(carboxyamino)imidazole ribonucleotide synthase
protein_id - extdb:FAM19471-i1-1.1_001323

Gene Locus

Located on scaffold FAM19471-i1-1_scf27

Cellular location expand

Responsible annotations:
SL-0229: GO:0005622 intracellular anatomical structure
SL-0086: GO:0005737 cytoplasm
SL-0091: GO:0005829 cytosol
FAM19471-i1-1.1_001322
FAM19471-i1-1.1_001324