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Tools
TAXID 1613
ORGANISM FAM19471
GENOME FAM19471-i1-1.1
GENE FAM19471-i1-1.1_001501
locus tag:
FAM19471-i1-1.1_001501
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
Type
Name
Description
Pathways
Gene Product
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KEGG reaction
R08701 tRNA uridine 5-carboxymethylaminomethyl modification; tRNA containing 2-thiouridine + Glycine + Folinic acid + Reduced acceptor <=> tRNA containing 5-carboxymethylaminomethyl-2-thiouridine + Tetrahydrofolate + Acceptor + H2O
Ortholog
N0.HOG0003539 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
Gene Code
mnmE
KEGG gene
K03650 mnmE, trmE, MSS1; tRNA modification GTPase [EC:3.6.-.-]
Eggnog Protein
EP:mnmE
Eggnog Ortholog
EO:COG0486
Eggnog Description
ED:Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs
Sequences
Nucleotide sequence (GC-content: 56.0 %):
A T G G C A A A T T C A G A G C A A G A C A C A A T T G C G G C A A T C T C G A C C C C G G T T G G G G A A G G G G G G A T C T C A A T C A T C C G G G T G T C C G G C G A C C A G G C C C T A G A C G T G G T A A G C C G G A T T T T T A A G G G C A A G G A T C T T C A C C A A G T T A A A A G C C A C A C C A T T A A C T A C G G G C A C A T C A T C G A T C C C G C A A G C G G G G A A A C G G T A G A T G A G G T A A T G G T T T C G G T G A T G T T A G C C C C C A A G A C C T A C A C C A A A G A A G A C G T G G T G G A A A T C A A C T G C C A T G G G G G G C T G T T G G C G A C T A A C C G G G C C C T A C A A T T A A C C T T A A C C A A C G G G G C G C G G T T G G C C G A A C C C G G T G A G T A C A C C A A G C G G G C C T T T T T A A A C G G C C G T T T A G A C C T C T C C C A G G C C G A A G C G G T G A T G G A T C T G A T C C G G G C C A A G A C T G A C A A G T C G A T G A A G G T G G C C C T A A A C C A A C T C G A C G G G G A C C T G T C G C G G T T G A T T A A G G C C C T A C G C C A A G A T A T C C T G G A C G T T T T G G C C C A G G T A G A G G T C A A C A T C G A C T A C C C C G A A T A C G A C G C G G T C G A A G A G A T G A C C A C T A A G A T G C T A A A G G A A A A G G C C A G C G A G G T T C G C C A A C G C T T G G A A A C C C T C T T G C A A A C G G C C A A G G A A G G C A A G G T C T T A C G A G A C G G C C T G G C C A C C G C C A T C A T T G G G C G A C C G A A C G T C G G C A A G T C G A G C C T T T T A A A C G C C C T C T T G C A C G A G G A T A A G G C G A T C G T G A C C G A A G T A G C G G G G A C G A C C C G T G A C G T G A T T G A A G A A T A C G T C A A C G T G G C T G G G G T A C C A C T G A A G C T A A T T G A C A C G G C A G G G A T C C G T C A C A C C G A C G A C A C G G T C G A A A A A A T C G G G G T T G A G C G C T C C A A G C A A G C G A T T G A A A C C G C C G A C C T G A T C C T C T T G T T G A T C G A C T C C A G C C G C C C G C T G A C C G A A G A G G A C C G G G C G C T A A T T G A G G C C A C C G C A C A A A A A C C C C G G A T G G T G A T C T T T A A C A A G A C C G A C C T G C C G G C C C A A G T T G A C C T G G C T G A G C T A A C C G A A C T C G T T A A C G G T G A C C C G G T C A T T C A G A C C T C C A T C T T G G A A C A C G C C G G G A T G C A G G A A C T G G G T C A A G C A A T C G C C C A C C G C T T C T T T A A C G A G G G G A T T G A A T C T A A T C G G G G C G C C G T G A T G G T C A C T A A C G C C C G C C A C A T C G G C C T G T T G C A C C A G G C A G T T G A C T C G C T C A A C G C C G T T T T G G A G G G G A T C G A G G C C G G A A T G C C G G T T G A C C T G G T G C A A A T T G A T A T G A C C G A C G C T T G G A A C A C G C T G G G G G A A A T T A C C G G C C A G A C C T A C C A A G A C G A G T T G C T T G A C C A G C T C T T T A G C C A A T T C T G T T T A G G A A A G T A G
Protein sequence:
M A N S E Q D T I A A I S T P V G E G G I S I I R V S G D Q A L D V V S R I F K G K D L H Q V K S H T I N Y G H I I D P A S G E T V D E V M V S V M L A P K T Y T K E D V V E I N C H G G L L A T N R A L Q L T L T N G A R L A E P G E Y T K R A F L N G R L D L S Q A E A V M D L I R A K T D K S M K V A L N Q L D G D L S R L I K A L R Q D I L D V L A Q V E V N I D Y P E Y D A V E E M T T K M L K E K A S E V R Q R L E T L L Q T A K E G K V L R D G L A T A I I G R P N V G K S S L L N A L L H E D K A I V T E V A G T T R D V I E E Y V N V A G V P L K L I D T A G I R H T D D T V E K I G V E R S K Q A I E T A D L I L L L I D S S R P L T E E D R A L I E A T A Q K P R M V I F N K T D L P A Q V D L A E L T E L V N G D P V I Q T S I L E H A G M Q E L G Q A I A H R F F N E G I E S N R G A V M V T N A R H I G L L H Q A V D S L N A V L E G I E A G M P V D L V Q I D M T D A W N T L G E I T G Q T Y Q D E L L D Q L F S Q F C L G K
GenBank Info
gene - mnmE
Gene Locus
Located on scaffold FAM19471-i1-1_scf33
FAM19471-i1-1.1_001500
