update range to 10000 bp
locus tag: FAM19471-i1-1.1_001503 genome: FAM19471-i1-1.1
species: Limosilactobacillus fermentum taxid: 1613

Annotations

Type Name Description Pathways
Ortholog
 N0.HOG0001105 large conductance mechanosensitive channel protein MscL
Gene Code
 mscL
Gene Product
 large-conductance mechanosensitive channel protein MscL
KEGG gene
 K03282 mscL; large conductance mechanosensitive channel
Eggnog Protein
 EP:mscL
Eggnog Ortholog
 EO:COG1970
Eggnog Description
 ED:Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell

Sequences

Nucleotide sequence (GC-content: 47.9 %):

ATGTTAAAAGAGTTTAAAGAGTTCATCGCCCGCGGGAACGTGATGGACCTGGCCGTTGGGGTTATCATCGGGGCTGCCTTCACGGCAATCGTGAAGTCGTTGGTTTCCAATTTGATTAACCCGTTGATCGGGATTTTCCTGGGGAAGATCGACTTGTCCAACCTGGTCTTTTCCATCGGTTCCGCCCACTTCCGTTACGGTTCCTTCTTAAACGAAGTGATCAACTTCTTGATCATCGCCTTCGTGGTCTTCTTGATGGTCAAGGGGATCAACAAGGTAATGCCAAAGAAGGAAGAAGAAGCGGTCAAAGAGGGCCCGTCCAAGGAAGAAGAATACCTTGGCCAAATTGTCGAATTGCTGAAGAAGCAAGATAAGTAA

Protein sequence:

MLKEFKEFIARGNVMDLAVGVIIGAAFTAIVKSLVSNLINPLIGIFLGKIDLSNLVFSIGSAHFRYGSFLNEVINFLIIAFVVFLMVKGINKVMPKKEEEAVKEGPSKEEEYLGQIVELLKKQDK

GenBank Info

gene - mscL
locus_tag - FAM19471-i1-1.1_001503
inference - COORDINATES: similar to AA sequence:RefSeq:WP_015639643.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - large-conductance mechanosensitive channel protein MscL
protein_id - extdb:FAM19471-i1-1.1_001503

Gene Locus

Located on scaffold FAM19471-i1-1_scf33

FAM19471-i1-1.1_001502
FAM19471-i1-1.1_001504