locus tag:
FAM19471-i1-1.1_001511
genome:
FAM19471-i1-1.1
species:
Limosilactobacillus fermentum
taxid:
1613
Annotations
| Type |
Name |
Description |
Pathways |
|
Gene Product
|
tRNA dihydrouridine synthase DusB |
|
|
|
Ortholog
|
N0.HOG0001065 |
tRNA dihydrouridine synthase DusB |
|
|
KEGG gene
|
K05540 |
dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] |
|
|
Eggnog Protein
|
EP:dus |
|
|
|
Eggnog Ortholog
|
EO:COG0042 |
|
|
|
Eggnog Description
|
ED:Catalyzes the synthesis of 5 |
|
|
|
Gene Code
|
dusB |
|
|
Sequences
Nucleotide sequence (GC-content: 54.4 %):
ATGGAATGGAAGATCGGGAGCGTCACAATCCCTAACCAAGTGGTTGTGGCACCGATGGCTGGGGTCATGAACACCGCCTTTCGGGTGATCTGTAAGAAGTTTGGCGCCGGCTACGTGGTTTCGGAAATGATTTCCGACCGCGGGATTATGTACCACAACAAAAAGACCCTGCAAATGATGGGTGTCGACCCGGTCGAACACCCGATGGGACTGCAAATCTTTGGTGGGACCAAAGAGACCCTGGTGGAGGCCGCTAAGTTTGTCGACGAAAACACCGATGCCGATGTGATCGACATTAACATGGGCTGCCCCGTTAATAAGATCGTCAACACTGAGGCTGGTTCCCGGTGGCTATTAGACCCCAACAAGGTTTACGAGATGGTTTCTTACGTGACCGACGCCGTAAAAAAGCCCGTAACCGTTAAAATGCGGACGGGCTGGGACGACCAGCACATCTTTGCCGTGGAAAACGCCCTAGCGGCACAGCGGGCAGGGGTAGCAGCGGTGGCAATGCACGGCCGGACCCGTAAGCAAATGTACCGGGGTCACGCTGATTGGGATATCTTGAAGGAAGTGGCCAGCCAGCTGACGATCCCGTTTATGGCTAACGGAGACATTAAGACTGCTGAAGAAGCCAAGTATGTATTGGAATACACCGGTGCCGATGCCATTATGATTGGGCGGGCCGCCATGGGGAACCCGTGGATGCTGACGCAGACGGTTCACTACTTAGAAAACGGGGAACTACTGCCGGAAGCAACGCCGGAAGAAAAAATCACGACGGCCAAGGAGCACTTGGCACGCCTGGTGGACCTGAAGGGTGAATACGCTGGGGTCCGGGAATTCCGCGGGCAAGCAGCTTACTACATGAAGGGAATTCCGCGGGCCGCCCGGACGAAGGTGGCCCTGATGGAAGCCACTGAACAGGCACAAATGGACGAGATCTTTGACCGGTTTATTGACCAGTACGAAGAACGTCAATTACAACAAAACGTAAACTAG
Protein sequence:
MEWKIGSVTIPNQVVVAPMAGVMNTAFRVICKKFGAGYVVSEMISDRGIMYHNKKTLQMMGVDPVEHPMGLQIFGGTKETLVEAAKFVDENTDADVIDINMGCPVNKIVNTEAGSRWLLDPNKVYEMVSYVTDAVKKPVTVKMRTGWDDQHIFAVENALAAQRAGVAAVAMHGRTRKQMYRGHADWDILKEVASQLTIPFMANGDIKTAEEAKYVLEYTGADAIMIGRAAMGNPWMLTQTVHYLENGELLPEATPEEKITTAKEHLARLVDLKGEYAGVREFRGQAAYYMKGIPRAARTKVALMEATEQAQMDEIFDRFIDQYEERQLQQNVN
GenBank Info
gene - dusB
locus_tag - FAM19471-i1-1.1_001511
inference - COORDINATES: similar to AA sequence:RefSeq:WP_003713210.1
note - Derived by automated computational analysis using gene prediction method: Protein Homology.
codon_start - 1
transl_table - 11
product - tRNA dihydrouridine synthase DusB
protein_id - extdb:FAM19471-i1-1.1_001511
Gene Locus
Located on scaffold FAM19471-i1-1_scf34
FAM19471-i1-1.1_001510
